| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1062 |
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| Symbol | |
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| ID | 4439735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1065520 |
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| End bp | 1066395 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672903 |
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| Product | membrane protease family stomatin/prohibitin-like protein |
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| Protein accession | YP_814873 |
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| Protein GI | 116629701 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000072755 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAATGC GAATTTTACT AATTGTTTTG GTGATTTTAG TTTTAGTTCT ATTAGCTTTA
AGCTTTCATA TTGTTCCGCA AAACTATGAA GGTTTAGTTG AAACTTTAGG TAAGTATTCA
CGAACTGTAA AAGCAGGCTT TGTGATGATT TTTCCTGGAG TTCAAAGAAT TAGAAAAGTG
TCGCTAGCTC TTCAACCTTT AGAAATTTCT AAATACCGAA TTATTACTAA AGATAACGCT
GAAATTACTA CTAGTCTGAC TTTAAACTAT CTTGTCACTG ACTCTTATAA GTACTTCTAC
AACAACACTG ATTCTGTTGA ATCAATGGTG CAATTAATTC GTGGGCACCT TCGTGATATT
ATTGGCCGAA TGGAATTAAA CGAAGCTCTA GGTTCAACTA GTCAGATTAA CGCACAACTT
GCCGAAGCAA TTGGCGATTT GACTGACATT TATGGTATTC GCGTTGTTCG TGTCAATGTT
GACGAATTGC TTCCTAGTCC TGAAATTCAA AAGGCAATGG ATAAGCAATT AACGGCTGAT
CGTGAAAAAA CAGCGGCAAT TGCACGTGCT GAAGGTGAAG CCAGAAATAT CGAATTAACT
ACTAAGGCGA AAAATGATGC CTTAGTTGCT ACAGCCAAAG CGAATGCAGA AGCAATCAAA
ACTCAAGCTG ATGCCGATGC TTACAGAATT AAGAAATTAC AAGAATCACT TGATAGCGCT
GGCGAGGGCT ACTTTAGAAA TCAAAGTCTT GATAGCTTCA ACCAACTTGC TCAGGGTCCT
AACAATTTAA TCGTTGTTGA TAAGGATGAA ATTAGCAATT TAGGAAAAAT TCCAGCTGCT
AAAAAAATCT GGGACCAAAG CAAAAAAGAA GATTAA
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| Protein sequence | MLMRILLIVL VILVLVLLAL SFHIVPQNYE GLVETLGKYS RTVKAGFVMI FPGVQRIRKV
SLALQPLEIS KYRIITKDNA EITTSLTLNY LVTDSYKYFY NNTDSVESMV QLIRGHLRDI
IGRMELNEAL GSTSQINAQL AEAIGDLTDI YGIRVVRVNV DELLPSPEIQ KAMDKQLTAD
REKTAAIARA EGEARNIELT TKAKNDALVA TAKANAEAIK TQADADAYRI KKLQESLDSA
GEGYFRNQSL DSFNQLAQGP NNLIVVDKDE ISNLGKIPAA KKIWDQSKKE D
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