Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1055 |
Symbol | |
ID | 4439728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1058927 |
End bp | 1059736 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 639672897 |
Product | hypothetical protein |
Protein accession | YP_814867 |
Protein GI | 116629695 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000188451 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATAG AAAAATTTAA GATAAAACTT GAAGATCCAA AGGCAACATA TTCTGACGAA GAGGTAGAGT GGCTACTTGA TAATATCGGA AATCCTGAAA GCAAAATTCG TGATAATTTA GTTTGTAATA GTTTTGGAAG TTCATTTTTC GAAGGAAAAT TTACTTTTGA CCAAGTTAAA TATTTGATTG ATCAACTTCA GAAGAAAAAT CTTCTATATT ATCGAATTAA CGAAAAGAAA GTGGCAACGT TAACTAGATC TTTTACATGC TTATTATGGG ATTTAATTAT TCGAACAAAT AATGATAAAC ATTCTCGTTA TTATCAGGTT TTAAATAAGA ATGAAGAGCA ACAAGTATTT GAAGATTTAA TCAATTATTT GGCTAATGAG CATGATTTTA CTGGTTTTTC AAAAAAATAT GGTTGGGTGC ATGCAATAGC ACATTGTTCA GATGCATTAG CAGATAGCAT ACTTTGTGAT AATTTTGATC AAAAAATGGT AAATGCTTTT TTATTAGCGG TTAAAGAAAT GTTGAATAAA GTCGATAGAC GTTTTATTGA CGGGGAAGAA TATCGTTTAG CTGATGTATT TGTAAATGGT ATTAAAGAAA ATAAAATTAA CTCTTATAGT TTTATTAATT GGATAAAATC ATTTGCTTTT AATCCTTATT CAGATGAACT TTTAGAATAC TATCGATTTA ATAATCTGAA GTCGTTGTTG CAAGTTATAT ATGTAAAATT AAATTCTATT TCACTGCTTG ATCCTAATGT AAAAGAAATA ATAGAGAAAA AATTCAATAG TAAATATTAA
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Protein sequence | MDIEKFKIKL EDPKATYSDE EVEWLLDNIG NPESKIRDNL VCNSFGSSFF EGKFTFDQVK YLIDQLQKKN LLYYRINEKK VATLTRSFTC LLWDLIIRTN NDKHSRYYQV LNKNEEQQVF EDLINYLANE HDFTGFSKKY GWVHAIAHCS DALADSILCD NFDQKMVNAF LLAVKEMLNK VDRRFIDGEE YRLADVFVNG IKENKINSYS FINWIKSFAF NPYSDELLEY YRFNNLKSLL QVIYVKLNSI SLLDPNVKEI IEKKFNSKY
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