Gene LGAS_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1055 
Symbol 
ID4439728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1058927 
End bp1059736 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content27% 
IMG OID639672897 
Producthypothetical protein 
Protein accessionYP_814867 
Protein GI116629695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000188451 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATAG AAAAATTTAA GATAAAACTT GAAGATCCAA AGGCAACATA TTCTGACGAA 
GAGGTAGAGT GGCTACTTGA TAATATCGGA AATCCTGAAA GCAAAATTCG TGATAATTTA
GTTTGTAATA GTTTTGGAAG TTCATTTTTC GAAGGAAAAT TTACTTTTGA CCAAGTTAAA
TATTTGATTG ATCAACTTCA GAAGAAAAAT CTTCTATATT ATCGAATTAA CGAAAAGAAA
GTGGCAACGT TAACTAGATC TTTTACATGC TTATTATGGG ATTTAATTAT TCGAACAAAT
AATGATAAAC ATTCTCGTTA TTATCAGGTT TTAAATAAGA ATGAAGAGCA ACAAGTATTT
GAAGATTTAA TCAATTATTT GGCTAATGAG CATGATTTTA CTGGTTTTTC AAAAAAATAT
GGTTGGGTGC ATGCAATAGC ACATTGTTCA GATGCATTAG CAGATAGCAT ACTTTGTGAT
AATTTTGATC AAAAAATGGT AAATGCTTTT TTATTAGCGG TTAAAGAAAT GTTGAATAAA
GTCGATAGAC GTTTTATTGA CGGGGAAGAA TATCGTTTAG CTGATGTATT TGTAAATGGT
ATTAAAGAAA ATAAAATTAA CTCTTATAGT TTTATTAATT GGATAAAATC ATTTGCTTTT
AATCCTTATT CAGATGAACT TTTAGAATAC TATCGATTTA ATAATCTGAA GTCGTTGTTG
CAAGTTATAT ATGTAAAATT AAATTCTATT TCACTGCTTG ATCCTAATGT AAAAGAAATA
ATAGAGAAAA AATTCAATAG TAAATATTAA
 
Protein sequence
MDIEKFKIKL EDPKATYSDE EVEWLLDNIG NPESKIRDNL VCNSFGSSFF EGKFTFDQVK 
YLIDQLQKKN LLYYRINEKK VATLTRSFTC LLWDLIIRTN NDKHSRYYQV LNKNEEQQVF
EDLINYLANE HDFTGFSKKY GWVHAIAHCS DALADSILCD NFDQKMVNAF LLAVKEMLNK
VDRRFIDGEE YRLADVFVNG IKENKINSYS FINWIKSFAF NPYSDELLEY YRFNNLKSLL
QVIYVKLNSI SLLDPNVKEI IEKKFNSKY