Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1043 |
Symbol | |
ID | 4439751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1052486 |
End bp | 1053187 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672886 |
Product | uridine phosphorylase |
Protein accession | YP_814856 |
Protein GI | 116629684 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2820] Uridine phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAG GACCATTTAT TTTAGATTTT GACAAAAATC CGCATGCGGT TCTTGAACCA AATCATGATC AAGAACCGTT TCATTTTCAT CCAAGATTGC TTTACGCATT TGTGCCAGAA AAAGAAATTA ACGCATTTTT AGATCAACAT CTTCATCGTA CTTTAGGCAA ATTTGAAACA TGCTCGTTTA ACCCAAAAAT CTATGAAGTT CAAATTGACA ATGAATTTTT CACTTTGTGT CAAGCACCCT TAGGAGCACC AGCTGCTGTA CAATTGCTTG AGTGGTTAAT CGCCTATGGT GTAGAAAAAG TCATAACGTT TGGTACTGCT GGAGCTTTGA ATGATTTACC AGAAAACGAA ATGTTTTTAG TTAAAAGAGC ACTTCGTGAT GAGGGTACGT CTTTTCATTA CATGGAACCA GGACAGTTTA TTGATTTAGA TCGTGATTTC TTGAATCAAG TAGAAGACGT ATTATCTGAA TTAAATTTAA AATATGATGA AATCACTACT TGGACAACCG ATGGTTTCTT TAGAGAAACG CCTAAAAAGG TTGCGCAATT TCGTCAGTTA GGCGCATCAA CTGTTGAAAT GGAATGCTCA GCTTTAGCAG CTTGTGCTAA GTTTAGGAAA GTTGATTTTG CTCAAATATT ATTTACTGCT GATACTTTAG CCGACATGGA AAATTATGAT GAACGTGATT AG
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Protein sequence | MNEGPFILDF DKNPHAVLEP NHDQEPFHFH PRLLYAFVPE KEINAFLDQH LHRTLGKFET CSFNPKIYEV QIDNEFFTLC QAPLGAPAAV QLLEWLIAYG VEKVITFGTA GALNDLPENE MFLVKRALRD EGTSFHYMEP GQFIDLDRDF LNQVEDVLSE LNLKYDEITT WTTDGFFRET PKKVAQFRQL GASTVEMECS ALAACAKFRK VDFAQILFTA DTLADMENYD ERD
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