Gene LGAS_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1043 
Symbol 
ID4439751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1052486 
End bp1053187 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content36% 
IMG OID639672886 
Producturidine phosphorylase 
Protein accessionYP_814856 
Protein GI116629684 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2820] Uridine phosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAG GACCATTTAT TTTAGATTTT GACAAAAATC CGCATGCGGT TCTTGAACCA 
AATCATGATC AAGAACCGTT TCATTTTCAT CCAAGATTGC TTTACGCATT TGTGCCAGAA
AAAGAAATTA ACGCATTTTT AGATCAACAT CTTCATCGTA CTTTAGGCAA ATTTGAAACA
TGCTCGTTTA ACCCAAAAAT CTATGAAGTT CAAATTGACA ATGAATTTTT CACTTTGTGT
CAAGCACCCT TAGGAGCACC AGCTGCTGTA CAATTGCTTG AGTGGTTAAT CGCCTATGGT
GTAGAAAAAG TCATAACGTT TGGTACTGCT GGAGCTTTGA ATGATTTACC AGAAAACGAA
ATGTTTTTAG TTAAAAGAGC ACTTCGTGAT GAGGGTACGT CTTTTCATTA CATGGAACCA
GGACAGTTTA TTGATTTAGA TCGTGATTTC TTGAATCAAG TAGAAGACGT ATTATCTGAA
TTAAATTTAA AATATGATGA AATCACTACT TGGACAACCG ATGGTTTCTT TAGAGAAACG
CCTAAAAAGG TTGCGCAATT TCGTCAGTTA GGCGCATCAA CTGTTGAAAT GGAATGCTCA
GCTTTAGCAG CTTGTGCTAA GTTTAGGAAA GTTGATTTTG CTCAAATATT ATTTACTGCT
GATACTTTAG CCGACATGGA AAATTATGAT GAACGTGATT AG
 
Protein sequence
MNEGPFILDF DKNPHAVLEP NHDQEPFHFH PRLLYAFVPE KEINAFLDQH LHRTLGKFET 
CSFNPKIYEV QIDNEFFTLC QAPLGAPAAV QLLEWLIAYG VEKVITFGTA GALNDLPENE
MFLVKRALRD EGTSFHYMEP GQFIDLDRDF LNQVEDVLSE LNLKYDEITT WTTDGFFRET
PKKVAQFRQL GASTVEMECS ALAACAKFRK VDFAQILFTA DTLADMENYD ERD