Gene LGAS_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1042 
Symbol 
ID4439750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1051971 
End bp1052420 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content35% 
IMG OID639672885 
Producthypothetical protein 
Protein accessionYP_814855 
Protein GI116629683 
COG category[S] Function unknown 
COG ID[COG4405] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGA ATATACAAAC ATTTTGGCAT CAATTTTGTA AAAAACATAA GATAAATGAA 
AATACACCCG TTGAAGCATG GGCCTTTGGT GCAACCCAAA AAGATGCTAA TGCGTTAGCT
TCTTTGGTCG ATAAAGGGAT TAAGACAGCT ACTACTTCAG CTTATGAATT GTATGGTAAA
GATGAAAAAT TACCTAAAGT AGGTGAGTGG AGCATTATTT TAGATAGTAA TGCTAAACCA
GTGTGCGTAA TAAAAGATGT ATGCGCTGAA ATCATCTCAT ATAATTTAAT TTCTCAAGAA
CATGCCTATC ATGAAGGAGA GGGCGATCGA AGCTATGCTT ATTGGCGAAA GGTTCATGAT
GAATTTTTTA CACGAGAATA TAAAGAGCAC GGGAAAGTTT TTTATCCTCA GGCGCCGATG
GTTTGCAAAG TTTTTGAAAA AATAAAATAA
 
Protein sequence
MDENIQTFWH QFCKKHKINE NTPVEAWAFG ATQKDANALA SLVDKGIKTA TTSAYELYGK 
DEKLPKVGEW SIILDSNAKP VCVIKDVCAE IISYNLISQE HAYHEGEGDR SYAYWRKVHD
EFFTREYKEH GKVFYPQAPM VCKVFEKIK