| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1036 |
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| Symbol | |
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| ID | 4439744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1044903 |
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| End bp | 1045928 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639672879 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_814849 |
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| Protein GI | 116629677 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00681507 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAA GATCCCAAAG AAAAGAAGAA CATCTAGCAT TGGCTAAGAT GTTTTTTAAT
AGTAATAAAA ATAATGATTT TAATCATATA CATCTAATTC GCCCTGCTCT GCCTGAAAGC
GCAGTAAGAA AAGAAAGCAT TACAACAGAA ATGTTTGGCC AAAAGATCAG TGCTCCATTT
TTTATCAATG CAATGACAGG TGGCTCAGAT GCTTCATATA CAATTAATCG ACGCCTCGCT
AAAGCAGCAG CTAAAGAGAA TATTCCCATG GCCTTAGGTT CTGCTAGCAT TCTTGAAAAA
GAAATTGATC AAATAAAAAG TTTTGAAATT GCTCGGCAAG AAAATCCTGA TGGTCTACTT
TTTGCTAATG TTAATCCAAC TACTAATCCT AAAGTGGCTC AAAAAATTGT CGATGCATTA
GATGCCAACG CCCTTCAAAT TCACCTTAAT AGTGTTCAAG AAGCTGTGAT GCCTGAAGGA
GACCGAGATT TTCATTGGCT TGATAATCTG AAGGCAATTC GTCAAACAGT CGATGTTCCG
ATTATTATTA AAGAAGTGGG AATGGGAATT GACCCCGAAT CTTTGCGGAC TCTCTTGATC
AATGACTTTT CAATTATTGA CTTAGGTGGT AGTGGTGGAA CAAATTTTGC TCAGATTGAA
AATGAAAGAC GAAAAAACCA AAAACTAATG TTTTTAGAAG ACATTGGTCT TTCAACAGTT
AAAACTCTGC TTGCTGCACG AACCATTCCG GTTAATAAGA CGATTATTGC TGCAGGTGGT
ATTACCAATG CTTTAGATAT TTTCAAGTCC TTAGTTTTAG GTGCACAATA TGTTGGGATT
GCCAATTATT TCTTACAGTT TGCTAGTCAG GATACCGAAT CCTTGATTGT CGCAATTCAA
AATCTTAAAT ACGAATTACG TCTCCTAACT GCCCTATTTG GATTAAAGGA TATTGCTGAA
GCAGATGAAG TTAAGTATTA TCTTGATACC GATTTATATA ATTTTACTCG ACAAATTTAT
AATTAA
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| Protein sequence | MSQRSQRKEE HLALAKMFFN SNKNNDFNHI HLIRPALPES AVRKESITTE MFGQKISAPF
FINAMTGGSD ASYTINRRLA KAAAKENIPM ALGSASILEK EIDQIKSFEI ARQENPDGLL
FANVNPTTNP KVAQKIVDAL DANALQIHLN SVQEAVMPEG DRDFHWLDNL KAIRQTVDVP
IIIKEVGMGI DPESLRTLLI NDFSIIDLGG SGGTNFAQIE NERRKNQKLM FLEDIGLSTV
KTLLAARTIP VNKTIIAAGG ITNALDIFKS LVLGAQYVGI ANYFLQFASQ DTESLIVAIQ
NLKYELRLLT ALFGLKDIAE ADEVKYYLDT DLYNFTRQIY N
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