| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1030 |
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| Symbol | |
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| ID | 4439775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1031873 |
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| End bp | 1034686 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639672873 |
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| Product | Rad3-related DNA helicase |
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| Protein accession | YP_814843 |
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| Protein GI | 116629671 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0174435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG CCTTTACAGA TGATGTTTTT GCGGTCGTCG ATCTTGAAAC TACAGGCACG
CAGCGTAATC AAGGCGATCA TATTATTCAA TTTGGTTGTG CAATCATCAA AAAGCGTAAG
GTAGTCAAAA CATATTCATT CTTAATCAAT CCTCATCGTG AAATCCCTCA AGCTGTTGAA
AATTTAACTC ATATTAGTAA TAGAGATGTT GCTCAAGCAC GCGATTTTAA TTACTATGCT
CCTAAAATTC GAAAAATCTT AGAGAATACA ATTTTTGTTG CACATAATGT TAATTTTGAT
CTTCCTTTTC TGAACTATGA ATTAGTAAAT GCTGGCTTAG AGCCATTAAC AGGAAAGGCA
ATTGATACAG TTGAATTAGC TCAAATTGCT TTTCCAACTT TTCCATCCTA CAAATTACGT
GACTTAACTG CTCGTTTAAA AATTAAGCAT TTAAATCCGC ACCGCGCTGA TTCAGATGCT
TTAGTAACAG CTAAATTACT GCTAAAAGTT ATTAAAAAAC TTGAAGCTCT TCCTCAGGCA
ACGTTAAATA CTTTAACTTC TTTATCTAAA GGATTATTGC GAGATACTGA TTATATTTTT
TATGAAATAG GACAAGTTGC TCGTCAAACA AAGAGACCAT TAGACAAAGA TTTAATTCAA
GTAAAGCATT TAATTCTTAA GAAACAAATT GTACCTTTGC GTCATATTGG AGCCGTAAGC
AAAGGCGAGT TTCCTCAAAG TGATGAGGAG AAGAAGAAAC TATTTAAGAA AAATTTGCGT
TTTAGACGTG GTCAAGTAAG TTTAATTAAT CGACTGCATG AATTTGTCTA TAGTGATACG
GACAACTCGT TAGTAGTTGA AGCGCCAAAT GGAAGTGGAA AAACTTTTAG CTATTTAATG
GCTTATGCGT ATGAGCTTTA TTCAGGTAGA AAATTGGTTG TAGCAACGCC TACGAAGGTC
TTGCAAGAAC AAATATTGAA ACAAGAGATA CCGCAGCTTC TAAGAGTAAC TCATTTAGAT
TTAGATGCTC AGATTGTTAA GTCAAGTAGT CACTATTTAG ATTTAGATGG TTTCTATAAT
TCACTATATC AAACTGATAA TGCTATCCAG CAAACTCTGA TTTTACAAAT GGGAATTTTG
ATTTGGCTCA CTGAAACTGA AACTGGTGAT TTAGATGAAC TGCAGTTAAC TAATTATCAA
GCGCCATTAT TTGCGGCAAT TGAGCATCCC GGGGATGCAA GAATTGGAAC TGCATTTGCA
GATTACGATT TTTGGAATCT TGCTCGAAGC AGACAAGAGC AAGCTGATAT TTTAATTACG
AATCATGCTT ATTTAGCAAA CCATTATATG GACTCAATTT GGGGACAAAA TCCATTTTTA
GTTGTTGATG AGGCACATCG TTTTGTTGAA AACGTGGCAA GTTCAAGAAA TGATTCGCTG
CAGTTTGAAA GCTTTTGGGG TATGTGTAGC CATTTGCGCA ACTTGCTTTT TTATGCAGAA
GACAGTGCAA AAGTTAGATT CGGTAATAAT ATCGAGTTTA AGATAATTTT GGATAAACTT
GAGAAAAATA CTACGGATTT AATTCATTCG ATAAACAAAG TTCAGCAAGC CCTTTATGAT
AATCGAAATT TTGCTACAAG TCGGGAAGAA AGAAGACAGA ATGCAATTAG TTTAGGCTTT
CAAGGACAGG ATTTATTTAG AAATGTTCCT CAGTTTAAAC AGTTGTTAAG TCAAATGCAG
GATAATATTG AAATTGTTCG TCAAGAAACA AATCAATTAT TATTTCTTTT ATATCATCAG
CAAAAGAATC TTTTGACTAG TGATGATGTT TTAATAAGGG ACTTGCAAGA AGAGATAGAC
CATCTTGACT ATTATTCAGA GCAGAATTAT CTTTTATTGG ATCAACTAAG CGAACCGCAG
AAGTTAGATC ACGAAGGATT TGTTTTGGAA ATCAGTAACG AAGATGATCC TTTATCAACT
AATTTAACTT GGTTAATGCT TGATCCTGAA GAAGAAGTGC AACAACTATA TCAATATTTT
GATAAAAAAT TGTTTATTTC AGCTACTTTA GCGCAGCAAG ATAATTTTTC ATATACAATC
AAAAATCTAT ATTTAGATCC TAAAAAAACG CTAACTTATC GTGCTAAGCC GTCTTTTAAG
GTGGAGAAGC ATTTAAAAGT TTATGCTCTC TCTGATAACG ATGCGCCTGA AGATCCAAAT
AGTCCCGAAT ATGAGGAGTT TATTAGTAAT TTGCTTACAC AGATTAAGAA TTACAATCAT
ATTTTGGTTT TGTTTACAAA TTTAGATGTT ATTCGTGATG TCTTTAGTAA GTTAAGTGAA
AGTAATAATT TAAAAGATTA TGAAATTTTA GCTCAAGGAT TAACTGGTTC AAATGAAAAA
ATTGCTAAAC GTTTTGGAAT TGCTGAAAAA GCCGTTTTGC TTGGGGCTAA TAGTTTCTGG
GAAGGAATCG ACTTCAAGCA TAACGGGGTA GACTTGGCAA TTGTTACGCG CTTACCGTTT
GAATCTCCTG ATCAACCAGA AGTAAAGTTG CGAACAGAAT GTTTAAAAAA GCAGGTTGGT
GCTGATAAGA TTTTTGAAGT TGATACACTG CCGCGAGCTA TTTTACGCTT TAGACAGGGC
TGTGGTCGCT TAATCAGAAA TGAACGTGAT CATGGCATCT TTATAATTTT AGATCAACGT
GTTTGGAATA AATCTTATGG TGAACAGTTT TTAGCTGGCC TTCCTGTGAG TGCAAAAAAG
GTCAGCAAAC AACAACTACT AAATGTTTTA AGGAATAGTA AGCAGAATGA ATAA
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| Protein sequence | MKKAFTDDVF AVVDLETTGT QRNQGDHIIQ FGCAIIKKRK VVKTYSFLIN PHREIPQAVE
NLTHISNRDV AQARDFNYYA PKIRKILENT IFVAHNVNFD LPFLNYELVN AGLEPLTGKA
IDTVELAQIA FPTFPSYKLR DLTARLKIKH LNPHRADSDA LVTAKLLLKV IKKLEALPQA
TLNTLTSLSK GLLRDTDYIF YEIGQVARQT KRPLDKDLIQ VKHLILKKQI VPLRHIGAVS
KGEFPQSDEE KKKLFKKNLR FRRGQVSLIN RLHEFVYSDT DNSLVVEAPN GSGKTFSYLM
AYAYELYSGR KLVVATPTKV LQEQILKQEI PQLLRVTHLD LDAQIVKSSS HYLDLDGFYN
SLYQTDNAIQ QTLILQMGIL IWLTETETGD LDELQLTNYQ APLFAAIEHP GDARIGTAFA
DYDFWNLARS RQEQADILIT NHAYLANHYM DSIWGQNPFL VVDEAHRFVE NVASSRNDSL
QFESFWGMCS HLRNLLFYAE DSAKVRFGNN IEFKIILDKL EKNTTDLIHS INKVQQALYD
NRNFATSREE RRQNAISLGF QGQDLFRNVP QFKQLLSQMQ DNIEIVRQET NQLLFLLYHQ
QKNLLTSDDV LIRDLQEEID HLDYYSEQNY LLLDQLSEPQ KLDHEGFVLE ISNEDDPLST
NLTWLMLDPE EEVQQLYQYF DKKLFISATL AQQDNFSYTI KNLYLDPKKT LTYRAKPSFK
VEKHLKVYAL SDNDAPEDPN SPEYEEFISN LLTQIKNYNH ILVLFTNLDV IRDVFSKLSE
SNNLKDYEIL AQGLTGSNEK IAKRFGIAEK AVLLGANSFW EGIDFKHNGV DLAIVTRLPF
ESPDQPEVKL RTECLKKQVG ADKIFEVDTL PRAILRFRQG CGRLIRNERD HGIFIILDQR
VWNKSYGEQF LAGLPVSAKK VSKQQLLNVL RNSKQNE
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