| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1024 |
|---|
| Symbol | recU |
|---|
| ID | 4439769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1025582 |
|---|
| End bp | 1026220 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639672867 |
|---|
| Product | Holliday junction-specific endonuclease |
|---|
| Protein accession | YP_814837 |
|---|
| Protein GI | 116629665 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3331] Penicillin-binding protein-related factor A, putative recombinase |
|---|
| TIGRFAM ID | [TIGR00648] recombination protein U |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 80 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGTTGA TGGTAAAATA TCCAACAGGC AGTTTAACAC ATTATACTAA AGATCAAACT
GACCTTCTGC ATCCAAGAAA ACAAAAGCAT CGCAAAGATG TCGTATTTTC TGATCGTGGA
ATGAACCTGG AGCAACAAAT TAATGAATCT AATAAGTATT ATCTTCTTGA AGATATTGCT
GTAGTTCATA AAAAGCCAAC TCCGGTTCAA ATTGTCAAAG TAGATTATCC CAAACGTTCT
CGAGCAGTCA TTAAAGAAGC TTACTTCAGG CAAGCATCTA CAACTGACTA TAATGGCGTT
TATCAAGGTC GATATTTAGA TTTTGAAGCT AAAGAAACGA GAAATAAAAG ATCTTTTCCT
TTGAAAAACT TTCATGAACA TCAGATCATC CATCTTGAAA GATGTTTAAA GCAAAAAGGG
ATTTGTTTTA CAATCATCCG TTTTGTAACT CTTAATCGCT ATTTCGTAAC TCCAGCGAGT
TTTGTAATTA AAGCTTGGAA AACACCGCAT AAGAGTTCGA TGACAATTCA AGAGTTGATT
AATAATTCAA TTGAAATTAA AAGCGGATTT CGACCAACAC TTCCTTACTT GGATGCGATA
GATAATTTTA TAGATAGGAA CAAAAAGAAT GGCAGATAA
|
|---|
| Protein sequence | MMLMVKYPTG SLTHYTKDQT DLLHPRKQKH RKDVVFSDRG MNLEQQINES NKYYLLEDIA
VVHKKPTPVQ IVKVDYPKRS RAVIKEAYFR QASTTDYNGV YQGRYLDFEA KETRNKRSFP
LKNFHEHQII HLERCLKQKG ICFTIIRFVT LNRYFVTPAS FVIKAWKTPH KSSMTIQELI
NNSIEIKSGF RPTLPYLDAI DNFIDRNKKN GR
|
|---|
| |