| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1018 |
|---|
| Symbol | |
|---|
| ID | 4439763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1020471 |
|---|
| End bp | 1021412 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639672861 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_814832 |
|---|
| Protein GI | 116629660 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0136614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 94 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAAA TTAATATTAT GAAAATCGGC GTTTTAACTG ACAGTTCATC TTATTTAACT
AAAGAACAAT GTGAAAAATA TGGTATTGAT ATACTACCAA TTCCAATTAT TTGGGACAAT
AAAGAATATC TCGATTTAAT CGATATTGGT TTTCACGAAT TTTATAAAAA GCTAAATAGC
TCTACAACCC TGCCGACTAC TTCTCAGCCA TCAATCGGAA CAGTTAAAAA ATATGTTGAA
AAGTATGTTG CTGAAGGATA TACAGATTTA ATTATTATTA CGCTCTCAAG CGGTATTTCT
AGTTTTTATA GTAATGTCTT AAGCGTAGCA AATGAAGAAA CACGTATTAA TATTCATCCC
TTTGACTGTA AAATCACATG TGCTGGAGAA GCAGATGCAG CAATCTTAGC TGGTCGACTG
GTTAAAGCGG GTGCTGATAT TAATCTAATC ATGCACGATT TAAAAGATCT ACGAAATACT
ACTGACGTTA GATTTATGGT AGATAGTCTT AATCACTTAA AACGAACTGG ACGTTTGTCA
AATGCTGCTA GTTTTGTGGG TTCTATTTTA AAAATTAAAC CCATCTTATC TATGGACGTT
CAAAACGAAG GTAAAATTTC TGCAATTGCT AAAGAAAGAC AGTATAAACG TGCTTATAAT
CATATTAAGA AAGACTTTAA TCGCCTAACT GCTAATATGC CTTATCCAAT TCAGCTAACA
ATTTTTCATG CTGATGATGA AAAAAGAGAA GCTGCATGGG TTAATGATTA TCAAGCAAGT
TTTCCAAAAG TTAAAGTTGA TCAGAGTATT ATCGGTCCAG TTGTTGGAGT TCACGTTGGT
CAGCATACTA TGGCAATGAT TTGGTGTCGT GACTTAGATT CTTACTTTGA TAAGAATGGG
CAACCACTCT TAAATATTAA TTCTCAAGCA GTCGAAGATT AA
|
|---|
| Protein sequence | MEEINIMKIG VLTDSSSYLT KEQCEKYGID ILPIPIIWDN KEYLDLIDIG FHEFYKKLNS
STTLPTTSQP SIGTVKKYVE KYVAEGYTDL IIITLSSGIS SFYSNVLSVA NEETRINIHP
FDCKITCAGE ADAAILAGRL VKAGADINLI MHDLKDLRNT TDVRFMVDSL NHLKRTGRLS
NAASFVGSIL KIKPILSMDV QNEGKISAIA KERQYKRAYN HIKKDFNRLT ANMPYPIQLT
IFHADDEKRE AAWVNDYQAS FPKVKVDQSI IGPVVGVHVG QHTMAMIWCR DLDSYFDKNG
QPLLNINSQA VED
|
|---|
| |