| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1014 |
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| Symbol | |
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| ID | 4439810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1016943 |
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| End bp | 1017857 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639672857 |
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| Product | pseudouridylate synthase, 23S RNA-specific |
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| Protein accession | YP_814828 |
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| Protein GI | 116629656 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000716198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 93 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGA ATTATCACTT AGTAATTGAA GAAGAAAAGG GACGCTTAGA TAAAGTGATT
GCTGAAAAGC TTAAAGATCT GAGCCGAACA AAAATTAAAG AGCTAGTTAA TGATAAAAAC
ATCCTAGTTA ATCATAAGGC TGAGAAAGTA TCCTATAAGG TGCAAGCTGG TGATTCAATT
GATATTACTG TCCCTCCAGC TAAGCCATTA TCATTAGAGG CCCAAAACTT AAATCTTGAT
ATTGTTTATG AAGACGCTGA TGTGATTGTA GTTAATAAGC CGCAAGGAAT GGTAGTTCAT
CCTTCAGCAG GCCACCCTGA TCATACTTTA GTTAATGGTC TACTATATCA TACTCATGAA
TTAGCTGATA GTCCTGAAGG TTTTCGACCA GGTATCGTTC ATCGAATTGA TAAAGATACT
TCTGGTCTAC TAATGGTAGC TAAGAACGAT AAAGCTCGTG AAAGTTTAGA AAAGCAATTA
GCAGAAAAAA TAAATAAGAG AGAATATTTA GCAATTGTTC ATGGTAACTT TGAAACCAAA
AATGGGGTCA TTGATGCTCC GATTGGCAGA AATCCCAATA ATCGGAAACA AATGGCGGTT
AATCCTAAAG GGAAAGCTGC AGTGACTCAT TTTACTGTGC TTGAGCAATT TAAAGACTAT
AGTTTAGTTA AATGTATTCT TGAAACGGGG AGAACTCATC AAATTAGAGT TCACATGAAA
TATATTGGTC ATCCTTTAGC TGGAGATCCT TTATATGGAC CTAAGAAAAC ATTGGCAGGA
CATGGTCAAT TTTTGCATGC CAAAACTTTA GGCTTTTATC AACCATCTAC ACACAAATGG
CTAGAGTTTT CTGCACCCCT ACCAGCGATT TTTGAAAAAC AATTAGAGAA TTTACGACGA
GAAGTGAAGC ATTGA
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| Protein sequence | MTENYHLVIE EEKGRLDKVI AEKLKDLSRT KIKELVNDKN ILVNHKAEKV SYKVQAGDSI
DITVPPAKPL SLEAQNLNLD IVYEDADVIV VNKPQGMVVH PSAGHPDHTL VNGLLYHTHE
LADSPEGFRP GIVHRIDKDT SGLLMVAKND KARESLEKQL AEKINKREYL AIVHGNFETK
NGVIDAPIGR NPNNRKQMAV NPKGKAAVTH FTVLEQFKDY SLVKCILETG RTHQIRVHMK
YIGHPLAGDP LYGPKKTLAG HGQFLHAKTL GFYQPSTHKW LEFSAPLPAI FEKQLENLRR
EVKH
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