Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0944 |
Symbol | |
ID | 4439863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 946043 |
End bp | 947617 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639672799 |
Product | adhesion exoprotein |
Protein accession | YP_814770 |
Protein GI | 116629598 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00559736 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAGGG TAAGTTTTAG TCATGTTTAT ATCATTAATA AAAAAAGTGG GAAAGTAGTT GAAGATCATG GCTTTCAGCC AAAAGAAAAG AGTATGCAAT TAATTGGTAC TCCAACACTT CCAGGTTATA TTCCCGATCG AGTAGTAGTT GGTGGAGAAA AGGTAACGGT TAATGACTTA AATAAAGAAT ATATAGTTTC TTTTAAGCTC AACATGAAAC CAACTAATAC AATACAAAAG GCAAAAATTA GATATGTAGA TTTAACTAAT AATAATCAAT TGCTGACAGA AGATACTGTT TCTGGTTTAG CAAATACACC AATTAATTAT GATCCTCAAC TTAAAATCAA GCATTTTGAA GAACAAGGCT ATAAATTAGT AGCTAATGAT TTTAATCATA ACGGAGATGT CCAATTTTTT GGCAGTTTGG ATGACTACTG CCCGGTTTTT ATTATTACTT TTATATCTGC TATTGAAGCT GTAAACGTAA ATAATCCTGT AGAATGGGTT GATCCATCTT TATATCATAG AAAGAGTAAG CTGATTGTTA ATTTTGAGGG ATGCTCAAAT CCGCCCGAGA AAATTATTCA AACAACTAAT TGGTTCCGAA CGATTACGAT TAATAAAGCT GCCAAAAAAG TAATTTCTCA TGGTGTTTAT GATAAAGCTT GGCATGCGGA TAAAGAAAGA TATCAAGAAA TTAAAGTTCC CGTTGTTCAG GGTTATCACG CTGATTTAGA TTTGATTAAA CCAAAATCTA TGACTTTAGA TGATCAAGCC ATTACAGTTC AGTACCACCC TAATGGTCAT TTGATTCCAG TTGATGAAGC GGGAGTTGCT ATTCCAGATG CACCAACGCC TCAGTTTGTA TCAGACTCTA GTGATGCAAG TAAAGTTAAA AACAATCAAA ATGTGCCGAA AGTAAGTGGC TATCAAGCAA CTCTCGCTAC AGTAACTCCA GCCAATCCAG GGCAAGATTT AACTGTAGTT TATGAAAAAA TAAATAATAA TGATGATACT TTATATATTA ATCTAAATCA CGATCATGAA TCAGATTCTC AAACTACAGT AGTTCGTAAA AATATTGACC AAAAAACCGA TTCGAAAAAT AATAAAGTTC AAACAGCAAT TATTAATTTT ATTGATATAG ATGATCATGG TCACTCTATT ACTTCTTCTG GAAAACTTTC TGGACGAGTT GGAGAATCAA TTAATGATTT ATATAGTACT GAAATCCCAT TAAAAGTATT GAAAGAACAA GGATATAAAG TTATATTTGA TGACTTTAAC GAAAATAGTG AAAAACAATA CTTTAAAGAC GGTGTTCTTC CTCAGATATT TACTATTGGA CTAAGTAAAA AGCAAAGCGA TAACCAGAGT AGTCAAGAAA GTTCAGATCT AAATGAAGAA TATGAAAAAT TACGTCAAAC AAGAGAGCAG TTTAAACAAA TAAAACCAAC GATTATGGAT AATTCTAACG AATTGAATTC TTCGCAAACT GTTAATAAAC TCATTGATAT TATTACAGGT TTATTAACTT TGATATTTAT GCTTAATAGA GGGGATAAGA AATAA
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Protein sequence | MTRVSFSHVY IINKKSGKVV EDHGFQPKEK SMQLIGTPTL PGYIPDRVVV GGEKVTVNDL NKEYIVSFKL NMKPTNTIQK AKIRYVDLTN NNQLLTEDTV SGLANTPINY DPQLKIKHFE EQGYKLVAND FNHNGDVQFF GSLDDYCPVF IITFISAIEA VNVNNPVEWV DPSLYHRKSK LIVNFEGCSN PPEKIIQTTN WFRTITINKA AKKVISHGVY DKAWHADKER YQEIKVPVVQ GYHADLDLIK PKSMTLDDQA ITVQYHPNGH LIPVDEAGVA IPDAPTPQFV SDSSDASKVK NNQNVPKVSG YQATLATVTP ANPGQDLTVV YEKINNNDDT LYINLNHDHE SDSQTTVVRK NIDQKTDSKN NKVQTAIINF IDIDDHGHSI TSSGKLSGRV GESINDLYST EIPLKVLKEQ GYKVIFDDFN ENSEKQYFKD GVLPQIFTIG LSKKQSDNQS SQESSDLNEE YEKLRQTREQ FKQIKPTIMD NSNELNSSQT VNKLIDIITG LLTLIFMLNR GDKK
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