Gene LGAS_0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0937 
Symbol 
ID4439856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp929924 
End bp930361 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content32% 
IMG OID639672792 
Productresponse regulator 
Protein accessionYP_814763 
Protein GI116629591 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000122555 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.418012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA AATTATTCAT TGAACCAAGT AAAGCAGAAA TAGTGGAAGC TTATGTACAT 
CAAAAAAGTG ATTTTTCAAC TCAACTAAAA GAGTTTGTTT TATCAAACGG CGATTCAAAT
ACAATTGTAG CTTACGATGA TAAAGATTTA ACTATGGTCA GCTTTTCAGA TATTGTCATG
ATTACAATTG TTGAAAATAA GGTTCTAGCC ATCTGTACTA ATGACAAGCA ATATCATATT
AGAAAGCGAC TGTATCAACT GACTGATCTT CTTCCATCCA ACTTTTGGAA AATCAATAAA
TCAGCGATAG CCAATCGGCA CTATATTGTC CACTTTGAAG AAACCAAAAA CTCTGGAGTC
AATATTATTA TGAAAAATGG ACTAACTGAT TATGTTTCAA GACGTTGCTT TGCCAAAATT
AGAAAGGAAC TGAATTAA
 
Protein sequence
MKFKLFIEPS KAEIVEAYVH QKSDFSTQLK EFVLSNGDSN TIVAYDDKDL TMVSFSDIVM 
ITIVENKVLA ICTNDKQYHI RKRLYQLTDL LPSNFWKINK SAIANRHYIV HFEETKNSGV
NIIMKNGLTD YVSRRCFAKI RKELN