Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0937 |
Symbol | |
ID | 4439856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 929924 |
End bp | 930361 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639672792 |
Product | response regulator |
Protein accession | YP_814763 |
Protein GI | 116629591 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000000122555 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.418012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTCA AATTATTCAT TGAACCAAGT AAAGCAGAAA TAGTGGAAGC TTATGTACAT CAAAAAAGTG ATTTTTCAAC TCAACTAAAA GAGTTTGTTT TATCAAACGG CGATTCAAAT ACAATTGTAG CTTACGATGA TAAAGATTTA ACTATGGTCA GCTTTTCAGA TATTGTCATG ATTACAATTG TTGAAAATAA GGTTCTAGCC ATCTGTACTA ATGACAAGCA ATATCATATT AGAAAGCGAC TGTATCAACT GACTGATCTT CTTCCATCCA ACTTTTGGAA AATCAATAAA TCAGCGATAG CCAATCGGCA CTATATTGTC CACTTTGAAG AAACCAAAAA CTCTGGAGTC AATATTATTA TGAAAAATGG ACTAACTGAT TATGTTTCAA GACGTTGCTT TGCCAAAATT AGAAAGGAAC TGAATTAA
|
Protein sequence | MKFKLFIEPS KAEIVEAYVH QKSDFSTQLK EFVLSNGDSN TIVAYDDKDL TMVSFSDIVM ITIVENKVLA ICTNDKQYHI RKRLYQLTDL LPSNFWKINK SAIANRHYIV HFEETKNSGV NIIMKNGLTD YVSRRCFAKI RKELN
|
| |