| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0936 |
|---|
| Symbol | |
|---|
| ID | 4439855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 929509 |
|---|
| End bp | 929922 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 639672791 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_814762 |
|---|
| Protein GI | 116629590 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000000000108571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.333694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACT TTATCAAAAA CTTTGTTAAA AGTGGACTAC AGGCGGCTGG CTTTGGTCCT
CTAATTCTTG TAATCTTTTA CTCTATTTAT TCATTTACTA TTAAATTTCA GACTATTTCA
GTTCAAGATG TAAATAAAAA TATTATCTCC AGTCTTTTAC TTGCTTTTAT CGCTGGTGGC
ATTAACGCAA TCTTTAAAGT TGAAAGAATT CCATTCGGTC TTGCAACAAC GATTGATGCT
ATTGTCATCT ACCTTGATTA TCTTCTTTTC TATATCCTTA ATGATTGGAT CAAGTTACAA
ATGATACCAT TCCTTGTTTT TACAGTTCTT TACATTATCG GCTACTTAAT TATTTGGCTA
TGTATTTACC ATCAAGTAAA AAATCAAGTT CAAAAATTAA ATCAAAAATT GTAA
|
|---|
| Protein sequence | MKDFIKNFVK SGLQAAGFGP LILVIFYSIY SFTIKFQTIS VQDVNKNIIS SLLLAFIAGG
INAIFKVERI PFGLATTIDA IVIYLDYLLF YILNDWIKLQ MIPFLVFTVL YIIGYLIIWL
CIYHQVKNQV QKLNQKL
|
|---|
| |