| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0920 |
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| Symbol | hslU |
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| ID | 4439944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 918641 |
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| End bp | 920035 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639672776 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_814747 |
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| Protein GI | 116629575 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.269175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0195666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTGAAG AAAAAACTCC AAAACAAATT GTAGAATTAC TTGATAAATA TATTATTGGC
CAAAATGAAG CTAAAAAGTC TGTTGCGGTA GCCTTATATA ACCGTTACCG TCGTTTGCAA
CTACCTAAGC AAATGCAACA AGACATTACT CCCAAGAACA TGTTAATGGC TGGTCCTACT
GGCGTTGGTA AGACTGAAAT TGCACGTCGC TTGGCTAAAA TTGTTGACGC ACCTTTTGTA
AAAGTAGAAG CAACTAAGTT TACTGAAGTA GGTTATGTTG GACGTGACGT TGAGTCAATG
GTTCGTGACT TAGTTGAAGA AGCAGTTCGC ATGGAAGAAA AGGAACAATT CGATCGTGTT
AAGTTGCAAG CAACTAAGAA AGCAAATAAC CGTTTAGTTA AGTTAATTGT TCCAGGTATT
AAGCGTGAAA ACCGCGAAAA TTCAATGCAG CAAATGATGC AGATGCTTTC TGGCAACTTC
AACATGAATC AAGCTCAAGA TAATGAAGAG GTAACTGACG ATATTCGCAA TGAACGTCTT
AGCGTAGCTG ATCAACTTAA TAAGGGCTTA CTTGAAAATC GTGAAGTAAC AATTGAAGTT
GAACAAGCAC CTAAGGTTAA CCCAATGGGC GACATGATGG GCCAAATGGG AATTGATATG
TCGAGCTTGA TGGGTGACTT AATGCCTAAG AAGACTGTTA AGCGTACTTT GAAGGTGTCA
GATGCACGTG AAGTTTTAAT TCAAGAAGAA TCTAAGAAGT TAATTAATTA CGATTCTCTC
TACCAACGAG CAATAGAGCG TACTCAGCAA AATGGAATTA TCTTTATCGA TGAAATTGAT
AAGATTACTG CTGGTAACAA GAAGACTTCT GGAGAAGTTT CTCGTGAAGG TGTCCAAAGA
GATATCTTGC CAATTGTTGA AGGCTCAACC GTTTCAACTA AGTACGGCCC TGTATCAACT
GATCATATTC TCTTTATTGC AGCTGGTGCC TTTGCTGAAA GTAAGCCAAG TGATTTGATC
CCAGAATTGC AAGGGCGTTT TCCAATCCGG GTTGAATTAA ACGCCTTAAC TCAAGAAGAT
TTTGTCAAGA TCTTGAAGGA TCCTCAAAAT TCACTTTTGA AACAATATAT TGCACTTCTT
AAGGCTGATG GCATTAAGCT AGTCTTTACT CAAGAAGCAA TTGATCGTAT TGCTCAAATT
GCCTTTGAAG TAAATCAAGG CACTGACAAC ATCGGTGCTC GTCGTTTAGC AACTATCTTA
GAAAAGCTGC TCGAAGATGT GCTTTACGAG GGACCAGATA TGAACATGGG CGAAATTACT
ATTACTCAAA AGTATGTTGA CCAAAAATTG AGTGATATAA TTATCAATAA GGACTTAACA
AAATTTATTT TGTAA
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| Protein sequence | MTEEKTPKQI VELLDKYIIG QNEAKKSVAV ALYNRYRRLQ LPKQMQQDIT PKNMLMAGPT
GVGKTEIARR LAKIVDAPFV KVEATKFTEV GYVGRDVESM VRDLVEEAVR MEEKEQFDRV
KLQATKKANN RLVKLIVPGI KRENRENSMQ QMMQMLSGNF NMNQAQDNEE VTDDIRNERL
SVADQLNKGL LENREVTIEV EQAPKVNPMG DMMGQMGIDM SSLMGDLMPK KTVKRTLKVS
DAREVLIQEE SKKLINYDSL YQRAIERTQQ NGIIFIDEID KITAGNKKTS GEVSREGVQR
DILPIVEGST VSTKYGPVST DHILFIAAGA FAESKPSDLI PELQGRFPIR VELNALTQED
FVKILKDPQN SLLKQYIALL KADGIKLVFT QEAIDRIAQI AFEVNQGTDN IGARRLATIL
EKLLEDVLYE GPDMNMGEIT ITQKYVDQKL SDIIINKDLT KFIL
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