| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0917 |
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| Symbol | |
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| ID | 4439941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 915859 |
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| End bp | 917175 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639672773 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_814744 |
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| Protein GI | 116629572 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.0255026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAGA ATGTAACTGT AATTGGCGGT GGCCTTGCAG GAAGTGAAGC TGCATGGCAA
TTAGCTAAGC GTGGCATTGA AGTAGAGTTA TATGAAATGC GACCAAAGAA AACTACACCT
GCTCATGAAA CTGCTAATTT TGCCGAATTA GTATGTACTA ATTCAATGAG ATCTAACCAA
CTCTCAAACG CTGTTGGTTT GTTAAAAGAG GAAATGCGTC AGCTTGATTC TTTAATCATG
AAAGCTGCTG ATGAAACAGC TGTACCTGCT GGTGGAGCTC TAGCAGTTGA TCGGGATAAG
TTTAGTTCAG TGGTAACGCA AACTCTCAAA GACTTGCCAA ATGTACATGT TCATGAAGAA
GAGATTACTA AGATACCAAA AGATGGAATT ACTATTATTG CGACTGGTCC ACTTACTTCA
GATACATTAG CAGAACAGAT TAAGGATTTC TGTGGTACTG ATTCACTTCA TTTCTTTGAT
GCTGCGGCGC CAATTGTAGC TGCAAGCTCA ATTGATCGCG ACATTGTTTA TAAGAAATCG
CGCTATGACA AGGGTGAAGC AGCTTATTTG AACTGTCCAA TGACTAAGGA AGAATTCTTT
AATTTCTATA AAAACTTAGT CAGTGCAGAA ACAGCTACTT TGCACGGCTT TGAAGATAAA
AATGTCTTTG AAGGCTGCAT GCCAATTGAA GTTATGGCTA AAAGAGGAGA AAAAACGATG
CTCTTTGGAC CACTTAAGCC TGTTGGCTTA GAAGATCCTA AGACCGGGAA AACTCCTTAC
GCAGTTGTGC AGTTGCGCCA AGATAATGCA GCAAGTACGA TGTACAACAT TGTTGGTTTC
CAAACCCACC TGAAATATGG CGAGCAAAAG AGAGTCTTTT CAATGATTCC GGGTCTTGAG
AATGCAAAAT TTGTCCGTTA TGGTAAAATG CATCGCAATA CTTACATTGC TAGTCCAGAA
GTTTTAAATG CAAATTATGA GGCTAGAAAA CAAGCTGGTT TGTTTTTTGC GGGACAAATG
ACTGGAGTAG AGGGCTATGT AGAAAGTGCA GGTTCTGGAC TAATTGCCGG AATTAATGCA
GCTAGAGAAA CCGTAGGCGA AGAAACATTA GTTTTCCCTA AGTCAACAGC CTTAGGCTCA
ATGGCTCATT ACATCACAAC TACTAGTGCT AAACACTTCC AGCCAATGAA CGCATCTTAT
GCATTATTAC CAAAATTAGA TTATAAGGTT AGAAATAAAC AGGAAAGACA CTTGGAAATT
TCTAAACGAG CATTGAAAGA TCTTGAAACC TTTAAGGAAG AAAAGAAGCT TGATTAA
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| Protein sequence | MVKNVTVIGG GLAGSEAAWQ LAKRGIEVEL YEMRPKKTTP AHETANFAEL VCTNSMRSNQ
LSNAVGLLKE EMRQLDSLIM KAADETAVPA GGALAVDRDK FSSVVTQTLK DLPNVHVHEE
EITKIPKDGI TIIATGPLTS DTLAEQIKDF CGTDSLHFFD AAAPIVAASS IDRDIVYKKS
RYDKGEAAYL NCPMTKEEFF NFYKNLVSAE TATLHGFEDK NVFEGCMPIE VMAKRGEKTM
LFGPLKPVGL EDPKTGKTPY AVVQLRQDNA ASTMYNIVGF QTHLKYGEQK RVFSMIPGLE
NAKFVRYGKM HRNTYIASPE VLNANYEARK QAGLFFAGQM TGVEGYVESA GSGLIAGINA
ARETVGEETL VFPKSTALGS MAHYITTTSA KHFQPMNASY ALLPKLDYKV RNKQERHLEI
SKRALKDLET FKEEKKLD
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