| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0909 |
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| Symbol | |
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| ID | 4439881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 907779 |
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| End bp | 908444 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672765 |
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| Product | hemolysin III-like protein |
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| Protein accession | YP_814736 |
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| Protein GI | 116629564 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 87 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.000301026 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTTTTA AACAATTGTG GCAAGAGCCC AAAAATCGAT CAAAAACATA CAACATTTTA
AATAATATTT TTAGTGCTAT TACTCACGGA ATTGGTTTTT GCCTAGCAGT AGCTGGATTA
GTAATTTTAA TTGTAAAAGC TGCCCATACA GGAAGTGCAG TAAGAGTAAC TGCCTTTACT
CTTTATGGCT CAAGCTTGAT TATTCTCTAT CTCTTTTCAA CGCTCTATCA CAGTTTGATT
TTTACTAGGG CTAGACGAGT TTTCCAGATA TTTGATCATT CTTCAATTTT CATTTTAATT
ACTGGAACTT ATACGCCCTA TACTCTTGTT GCAATCGGCG GAGCTAAAGG ATGGGTAATG
TTTAGTATTA TTCTAGCTTT GGCAATTTTC GGTATCTTGT TTTATATTTT CAACCAAGGA
AAGCATGTCG TCTTAGATAC GATTTTGTAC GTATTAATGG GCTGGATTGT AATTATTGCT
TCTAGCACCC TTTATCCAGT TCTTGGGCCA ACTGGCTTTT GGCTCCTAGT TTGGGGCGGA
ATTACTTATA CTGTCGGCGC CATTTTATTT TCAATGCGCG GAGTTCCTTA TATCCATGTT
ATCTGGCATA TGTTTGTTTT ATTAGGATCA ATCCTGATGT ATTTTTCAAT TTTATTTTAC
GTTTAA
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| Protein sequence | MSFKQLWQEP KNRSKTYNIL NNIFSAITHG IGFCLAVAGL VILIVKAAHT GSAVRVTAFT
LYGSSLIILY LFSTLYHSLI FTRARRVFQI FDHSSIFILI TGTYTPYTLV AIGGAKGWVM
FSIILALAIF GILFYIFNQG KHVVLDTILY VLMGWIVIIA SSTLYPVLGP TGFWLLVWGG
ITYTVGAILF SMRGVPYIHV IWHMFVLLGS ILMYFSILFY V
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