| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0902 |
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| Symbol | |
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| ID | 4439874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 896235 |
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| End bp | 899576 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639672758 |
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| Product | Type I site-specific restriction-modification system, R (restriction) subunit related helicase |
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| Protein accession | YP_814729 |
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| Protein GI | 116629557 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.164801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00000563993 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTATCCG TGACTAACTT TGATTATTTA TTAGAAGAAC CACAATTTAA AGATTTCGTG
GAAATTGCAA TAGCTGCTGA GAAAGTAGCT GTTATTGATC CTGCAACATC GGTTATTGAC
TGCCGCCGTG CAATGGAATT GGCAGTTAAG TGGATGTATT CGGTTGATAA AGATTTAAGA
ACGCCATACC AAGATAAATT GGTAACCTTG ATAAACACCT TAGACTTTAA GGATATTGTT
GATCCTAATA CTTGGCAAGG TTTGGATCTG ATTCGCCGAT TAGGAAACGT GGCAGTACAT
ACTAATCGAA AAGTATCTCT AGATGAAGCT GTTTTATGTT TAAAGGCTTT ATTTAGTTTT
TTTGACATGC TTGATTATTG CTATGGTAGT AATTATCAAA AGAAAGATTT TGATAAATCT
CTTGTTGGAA AATATCGTTT GGAATTTATT CCAAAAGTAG TGTCAGCCGA AAAGGCTACG
TTTTCTCTTG ATAAACTGAC GAAGAAGAAC AAATCTTTGC AGGAATCTAT GACTGCGCAA
AGAAAGGCAC AGGAAGATAG CTATAATCCC AAGCCTTTTG GAATATCAGA ATTTAAAACC
AGGAAAATCT ACATTGATGC TATGCTAGCA GAAGCTGGTT GGGTTGAAGG ACAAAATTGG
TTAAACGAAG TAGAACTTAA AGGAATGCCT AATAAAGCAG GAATAGGATA CGCTGATTAT
GTTCTATATG ATGATGCACA CCAACCTCTT GCACTTATTG AAGCCAAGAA AACATGCAAA
GATGTTGCTG TTGGTCGTCA GCAAGCAAAA CTATATGCTG ATTTACTAGA GAAAAAATAT
GGACGTAGAC CAGTTGTATT TTTAAGTAAT GGTTTTGAAA CGAGAATTAT TGATAATCAA
TATCCCGAAA GACAAGTTTC ATCTATTTAT TCTAAGCGTG ATTTAGAAAA ATTATTTAAT
TTACAAAAAG TGCGTCAGCC ATTAACTAAT ATCATAGTTG ATGATAATAT TGCTGGTCGG
TATTACCAAA AAGCTGCTAT TCAGGCAGTG TGTGAAAGTT TTTCAAAGGA AAATAGACGC
AAAGCGTTAT TAGTCATGGC AACGGGATCA GGTAAAACTA GAACTGCAGT GGGCTTGGTT
AAGGTTCTTT TGAATGCTGG TTGGATTAAA CATGTCTTAT TTTTGGCTGA TAGGGATGCA
CTAGTAACAC AGGCTAAAAG GAGCTTTGTA AACTTGTTAC CAGACTTATC TTCAACTAAC
TTAGTCGAAG ATAAGTCAAA TTATAATGCG CGATGTGTAT TTTCTACCTA TGCTACGATG
ATGAATGTTA TCGATACTGC AACAGATGAC GATAAAAAGA AGTTATATAC TGCGGGACAT
TTTGATCTGA TTATTGTCGA TGAAGCTCAT AGGTCAATTT ATAACAAATA TCGGAATATA
TTCACTTATT TTGATGCTCC ATTGGTTGGT CTGACCGCAA CCCCTAAAGA TGATATTGAT
AAAAATACAT ATTCGATTTT TAATCTAGAA GATGGTGTTC CGACTTATGG CTATGATCTG
GCACAAGCAG TTGATGATGG CTACTTAGTG CCATACAAAT CTATCGAAAC TCATTTAAAG
TTTATGGAAA ATGGTATTAA TTACGATGAT CTAAGTACTC AAGAGAAAGA AGAATATGAA
GAAACTTTCA CTGATGAAGA TGGTGATTTA CCAAAGAAGA TAGACTCAGG AAAGTTGAAT
AAATGGTTGT TTAATAAAGA TACAATTCGT AAAGTTTTGA ATATTTTGAT GAATCAGGGC
CTAAAAATTG ATTATGGCGA AAAAATAGGG AAAACTATTA TTTTTGCTAA AAATCATCGT
CATGCGGAAG AAATCCTAAA AGTTTTCAAT GAAGAGTATC CTCAATTTAG TAGAAATACT
CATGGACAAC CATATGCAAC CGTAATCGAT AATTATACTA ACTATTCTCA AAGTGCAATT
GATGAATTTT CAGATCCAGA TAAGTTACCA CAAATAGCTG TTTCAGTTGA TATGTTGGAT
ACTGGAATTG ATGTACCTGA ATGCTTAAAC TTGGTATTTT TCAAAAAAGT AATGAGTAAA
GCAAAATTCT TCCAAATGAT CGGACGTGGA ACTCGATTGT GTCCACACTT ACTAGATGGA
AAAGATAAGC AAGAATTTTA TATTTTTGAT TTTTGTGATA ATTTTCATTT TTTCCGCATG
GGAAAAGGAC ATGAAGCAGG AGTTCAAGAA ACTTTGCAAA GTGCTTTATT TAACTTAAAG
ATGGAATTAG TTCGGAAATT GCAAGAAGAA CCTTATCAAA CAGATGATTT TAATCAATAT
CGTAAAACAT TGGTTGAAGA TCTATGTAAA AAGGTTAAAG AATTAAATAG AAATAATTTT
GCTGTTAAGC AACATATTGC TTATGTTGAT AAGTTTTCTC AAATTGAAAA TTATAATAAT
TTGACTTATG AAGATATTGT AAATACTAAG AAGGAATTAT CTCCGTTGAT TCTTCCTGAT
AATGATGAGC CTAATGCTCT AAGATTTGAT GCTTTAGTTT ATAAAATGGA ACTTGCAAAA
ATGTCACAAG AATCATATGG GCGGCTAAAA ATTGATCTAT GTAATAAGGT TTCTAAACTC
TCTGATTTAA TGACTATTCC ACAAGTTAAG GAAAAAAAGG ATTTAATTAA AGAAATATTA
CAACCAGAAT ATGTTGAATC TACTGATGTT AAAGACTTAG AGTATATCCG GCAAAGTATT
AGAGATCTTA TTCAGTACCT TCCTAAAAAA GGAACGGTAT ATTATACAAA TTTTGCTGAC
ACTGTATTAG ATTCGACTAT TCATGACGCT GAACTTGAAA CAGATACTTT AAAGAACTAT
AAGGCAAAGG CGGAATTTTA TATTAAACAA CATCAAAGTG AAAATCTTAT GGTGAAGATT
AGAGACAATG AACCTTTAAG CAGCCAGGAT TTAAAAGAAT TAGAATCTAT TTTATGGCAA
AAGCTGGGAA GTAAGGAAGA ATATCAAAAA GAAATTGGTA ATAAGGCACC AGGCGAATTT
GTACGTAGCA TAGTTGGATT AGATATGCAT GCGGCTAAAA AGGCTTTTAA TAAATACCTA
GATACTGTTC CTTTAAATAA GCAACAAATC TATTTTATAA ATGAAATTAT CGAGTACATT
GTTAAGAATG GAACACTGAC TGATATGCAT GTTCTACAGG AATCTCCATT TACAAATCAA
GGTTCGATTT CTGAACTTTT TGAATCAGAT ATAACTATTT GGTTGAAAGT AAAAACAGCA
ATTGATGAAA TTAATAGTAA TGCTGGAGTA GTTGTAGCTT AA
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| Protein sequence | MLSVTNFDYL LEEPQFKDFV EIAIAAEKVA VIDPATSVID CRRAMELAVK WMYSVDKDLR
TPYQDKLVTL INTLDFKDIV DPNTWQGLDL IRRLGNVAVH TNRKVSLDEA VLCLKALFSF
FDMLDYCYGS NYQKKDFDKS LVGKYRLEFI PKVVSAEKAT FSLDKLTKKN KSLQESMTAQ
RKAQEDSYNP KPFGISEFKT RKIYIDAMLA EAGWVEGQNW LNEVELKGMP NKAGIGYADY
VLYDDAHQPL ALIEAKKTCK DVAVGRQQAK LYADLLEKKY GRRPVVFLSN GFETRIIDNQ
YPERQVSSIY SKRDLEKLFN LQKVRQPLTN IIVDDNIAGR YYQKAAIQAV CESFSKENRR
KALLVMATGS GKTRTAVGLV KVLLNAGWIK HVLFLADRDA LVTQAKRSFV NLLPDLSSTN
LVEDKSNYNA RCVFSTYATM MNVIDTATDD DKKKLYTAGH FDLIIVDEAH RSIYNKYRNI
FTYFDAPLVG LTATPKDDID KNTYSIFNLE DGVPTYGYDL AQAVDDGYLV PYKSIETHLK
FMENGINYDD LSTQEKEEYE ETFTDEDGDL PKKIDSGKLN KWLFNKDTIR KVLNILMNQG
LKIDYGEKIG KTIIFAKNHR HAEEILKVFN EEYPQFSRNT HGQPYATVID NYTNYSQSAI
DEFSDPDKLP QIAVSVDMLD TGIDVPECLN LVFFKKVMSK AKFFQMIGRG TRLCPHLLDG
KDKQEFYIFD FCDNFHFFRM GKGHEAGVQE TLQSALFNLK MELVRKLQEE PYQTDDFNQY
RKTLVEDLCK KVKELNRNNF AVKQHIAYVD KFSQIENYNN LTYEDIVNTK KELSPLILPD
NDEPNALRFD ALVYKMELAK MSQESYGRLK IDLCNKVSKL SDLMTIPQVK EKKDLIKEIL
QPEYVESTDV KDLEYIRQSI RDLIQYLPKK GTVYYTNFAD TVLDSTIHDA ELETDTLKNY
KAKAEFYIKQ HQSENLMVKI RDNEPLSSQD LKELESILWQ KLGSKEEYQK EIGNKAPGEF
VRSIVGLDMH AAKKAFNKYL DTVPLNKQQI YFINEIIEYI VKNGTLTDMH VLQESPFTNQ
GSISELFESD ITIWLKVKTA IDEINSNAGV VVA
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