| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0900 |
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| Symbol | |
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| ID | 4439872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 894168 |
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| End bp | 895136 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639672756 |
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| Product | integrase |
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| Protein accession | YP_814727 |
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| Protein GI | 116629555 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000819417 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.000000626468 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGAGA AGTTTGTTGA AATAATAAAT GAAATGGCTG AAGTGCTTAA TGCAGCACAA
TTAAAGCGAC TTCAGGAAGT AATGCTAAAA CATTTGGTCG AAAGAGAACC ACGAAAAAGA
AAAATTAGTA ATAAGGAATA CTTGGCTAAA TTTCTTGAAG CTAAAAAGAT GGAAGGTTGT
TCTGACAGAA CAATTAAATA TTACAAAGTT ACCGTTGAAC AGTTGTTGGC TAAGGTAATC
CGACCAATAC GTAGAATTAC TACGGAAGAA ATGCGTGAAT ATTTAGTTGA GTATCAAAAA
ATCAATAATT GCGGAAAGAC AACTATTGAT AACATTCGCC GTAATATTTC TAGTTTTTTC
TCATGGCTTG AGGAAGAAGA TTATATATTG AAAAGTCCTA TGCGACGTAT TCATAAAATA
CGAGCAGAAA AATTGGTAAA AAATGTAATT ACTGATGAAG ATATTGAAAA GCTGCGTGAT
GGCTGTTCCT GTTTAAGAGA TGTTGCAATG ATTGATTTAT TGTATTCAAC GGGTATTAGA
GTAGGTGAAC TTGTTCGACT TAATAGAAAT GATATTAATT TTTCTGAACG TGAATGTGTG
GTATTTGGAA AAGGAGATAA AGAAAGACGA GTATATTTTG ATGCCAAGTC AAAAGTACAT
CTTATTAACT ATCTAAGAAG TAGAGAGGAC GATAATCCAG CTCTTTTTGT TTCTTTAGAC
AAGCCAAATG ACAGATTGAA AATTAGTGGG GTAGAGATTA GGTTACGACA ACTTGGAAGA
AAACTACATT TAGATAGAAT TCATCCTCAT AAATTTAGAC GGAGTATGGC TACTAGAGCT
ATTGATAAAG GCATGCCAAT TGAGCAAGTA CAAAAAATTT TAGGACATTC TCAGATAGAC
ACGACAATGC AATATGCAAT TGTTAATCAA AATAATGTAA AAGCAGCTCA TAGAAAATAC
ATATCCTAG
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| Protein sequence | MDEKFVEIIN EMAEVLNAAQ LKRLQEVMLK HLVEREPRKR KISNKEYLAK FLEAKKMEGC
SDRTIKYYKV TVEQLLAKVI RPIRRITTEE MREYLVEYQK INNCGKTTID NIRRNISSFF
SWLEEEDYIL KSPMRRIHKI RAEKLVKNVI TDEDIEKLRD GCSCLRDVAM IDLLYSTGIR
VGELVRLNRN DINFSERECV VFGKGDKERR VYFDAKSKVH LINYLRSRED DNPALFVSLD
KPNDRLKISG VEIRLRQLGR KLHLDRIHPH KFRRSMATRA IDKGMPIEQV QKILGHSQID
TTMQYAIVNQ NNVKAAHRKY IS
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