| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0896 |
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| Symbol | |
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| ID | 4439868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 887576 |
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| End bp | 890329 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 639672752 |
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| Product | SNF2 family DNA/RNA helicase |
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| Protein accession | YP_814723 |
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| Protein GI | 116629551 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00366837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00000000137463 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGGTTTAA TGGATAAATT TGAAGCAAAA AAATTATTAC AAAAATTAGA TACTATACAA
AATTTTTTAA GTGAAAAAGA TTTGCCTAGG TTGGAAAGAA AGTTAGATGC TGAAGCAGAT
AATTTAAAAA GAAATATGTT CGATGATTGG CTTAGATCTA TTCCTAAGTC TGTTAAAGAA
ATTTTCTATG GCAAATTGAC TTATGATCAG TTATATTCGA AGTTTTTTCC TTCTGTCTTG
CACAGTTCAT TTTCTAAGAA CGAGATAGTT TTAGTGTTCT CCATTTTAAA ATCAAGGAAT
AAAATGGAAC AATACCAGCT AAAGTACTCA GAAAAATTAA GCAATTTAAA AGTATGTTTG
CAGTTTATAA AAGAAAACGA TCGATCTAAG TTTTTATCAA TTTTTCAGAA TCATGATATT
AAACAAAAAT TGCTTAAAGC TAAAGAATTT GCTGAGGAAA ATAAGAATGT GCTTTCTAAT
ATTCAATACA AAAGAGAAAA TGAATGGGAT GAAATAGCTG AATCATTTGA AGACTTAGAT
ATTAGCTTAA AAAATAAACG ATTTGAATAT TTAAATCCAT TTGTAAATTT AGATACAGAA
AAGTCTAAAG AAGATATAAT TTTTAAAATC ATACGTGATT TCCTTAAAAA TAAGATTTTA
TTTTTATCAG AACAGAGCAG AAATGGTGTA GAAGAAAGTA TTCGTGGTAT TTGGAAAAAC
TTGAAAGAAG AAGAGTTATC TAATCAATTA AATTCATTAC CTATAGAAAT GCTTAAAAAG
CAAATTGATA ATGAACAAAT TGGAGATGTT CTCGATAATT TTGATAATGT TGGACAAGTA
ATCTCATTAT CATTAGCAGA GGTTTCTGAG AGATATGGTT TAAATATGCA GCAAAGTGCT
GAAATTTTGA AACAATCTAA AGAGATACTG AATGACCTAA AATCTAATGT TTATCCTAAG
TTGACATTAG ATAAGTTAAA AGGACAAAGG TTGCAACTGC TACATTTGTT AAATGCTTAT
AAAAATTATC CAGATGAACA AGCTATAGAA GAAAAAGTAG TTATAGAGAA TTATAGAAAA
CTAGAAGAAA AACTAGGTAA TTTAGAAGAT ATTGCTCCTA ATAGATATCT AACTAATTTT
ATAGATAGCA TCACTTTTAA ATATTGGTGT GAGAGTGAAG CTGAAATCTA TAGGATATTA
GACGGCTGCA TTCAAGTTAA TAGTACATTT AGGGACTGTT TGAATGATAA TTTGAATGAT
CAAGAAATTA AAGCTCTTTT TGAAAAAGAT AGTGCAACAT TCTACGCTTT AATCGAAGAA
ATTACTGGCA ATAAAAAAAG TTATAATCCA TCTGATCTAC CAGATTATAT TGTACATGAA
GTTCAGAAGA CTAAACTTAA TCTTAAAGGA TTTAAAGCGC ATTTAAGATC ATATCAAGCT
TTTGGCAGTA AATATATTTT CTATTTTCAA AGGACCTTAT TGGGAGATGA AATGGGACTA
GGAAAAACTA TTCAGGCGCT CGCAGTCGCG ACGCATCTTT CAAATCAGGG ACAGACTCAT
TGTTTAGTTA TTAGTCCACT AAGTGTCCTT GAAAATTGGA AGAGAGAAAT TGAAAAATGG
ACTAATATAA AATGCTTTGT GTTTAGAGGA GATAAAGCTA TAAAAGAACA AAATTTGTCA
AAATGGGAGG AATCAGGAGG CATATTACTT ACTAATTATT CTCATTGCAG AATATTGAAA
GAAAGTAGAA AAAATATAGA TATTGATTTT GCAATAGTAG ATGAAGCACA TTTGATTAAA
AATCCTGCAA CAAAGCGTAG CAAAAATGTT AATGCTTTGA TTAAAAATTG TAAATATAAG
CTGTTAATGA CTGGTACTGC TCTAGAGAAT AGGCTTGATG AAATGATTAA CTTAATTGAC
TTTCTTAATG AGTCTCTAGC GGAAAAAGTT GCCAATAATT TAAATAATAA AACTTATAAG
ACGGATATAG CTCAAGTTTA CTTGAGACGA AAAAGAAAAG AAGTTTTACA TGAACTTCCA
GCATTAGGGC TTACAACAAT GTGGTCAACT TTTAATGAAA AAGAACAAGA CTTCTATGAT
CAAGCCGTGA GTGAAGGTAT TGCAGGATTG ATGAAGATGC GTAGAGCAGC ATTTATTGAT
GAAGATAGTC AAAAGATAGA GCAAATTATT AATATTTGTG TTGATTCACA TGAAAATAGT
GAAAAAGTTA TAGTTTTTTC ATTTTTCAAA AATTATGTTT TGAAATTGTT AAAGAAGAAA
TTGCCGTTTC TTGCAGACGA TATTATTAGT GGTGATTTAT CATCTAATCA GCGTCAAGAA
GTAATTGATA AATTCTCAGA AAATCCAAAT CAGAATGTAC TTTTAGTTCA AATAGATGCT
GGTGGATTTG GACTTAATAT CCAAGCTGCT AATAGAGTTA TTTTGTGTGA ACCGCAATGG
AAACCTTCGA CAGAAAACCA AGCTATAAGT AGAGCTTATA GAATGGGCCA AAATAGAAAT
GTTATGGTTT ATCGTTTGTT AACTAAGGAA AGTGTCGATG AAACCATGAT GGAAATTATT
CATGAAAAAG AAGATATTTT TAATACGTAT GCAAATGATT CTGTTGTTGC CGATGCATTT
ATGAATAATG ATTCAGATAA AGAAGAAAAT GAAGCTGTAA TGAAGAAAAA AGTATTTCAG
ATTGAGCGAG ACCGTTTAGA GAAAAAGCAG GAAGTGGTGA ATGTAAGTGA ATAA
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| Protein sequence | MGLMDKFEAK KLLQKLDTIQ NFLSEKDLPR LERKLDAEAD NLKRNMFDDW LRSIPKSVKE
IFYGKLTYDQ LYSKFFPSVL HSSFSKNEIV LVFSILKSRN KMEQYQLKYS EKLSNLKVCL
QFIKENDRSK FLSIFQNHDI KQKLLKAKEF AEENKNVLSN IQYKRENEWD EIAESFEDLD
ISLKNKRFEY LNPFVNLDTE KSKEDIIFKI IRDFLKNKIL FLSEQSRNGV EESIRGIWKN
LKEEELSNQL NSLPIEMLKK QIDNEQIGDV LDNFDNVGQV ISLSLAEVSE RYGLNMQQSA
EILKQSKEIL NDLKSNVYPK LTLDKLKGQR LQLLHLLNAY KNYPDEQAIE EKVVIENYRK
LEEKLGNLED IAPNRYLTNF IDSITFKYWC ESEAEIYRIL DGCIQVNSTF RDCLNDNLND
QEIKALFEKD SATFYALIEE ITGNKKSYNP SDLPDYIVHE VQKTKLNLKG FKAHLRSYQA
FGSKYIFYFQ RTLLGDEMGL GKTIQALAVA THLSNQGQTH CLVISPLSVL ENWKREIEKW
TNIKCFVFRG DKAIKEQNLS KWEESGGILL TNYSHCRILK ESRKNIDIDF AIVDEAHLIK
NPATKRSKNV NALIKNCKYK LLMTGTALEN RLDEMINLID FLNESLAEKV ANNLNNKTYK
TDIAQVYLRR KRKEVLHELP ALGLTTMWST FNEKEQDFYD QAVSEGIAGL MKMRRAAFID
EDSQKIEQII NICVDSHENS EKVIVFSFFK NYVLKLLKKK LPFLADDIIS GDLSSNQRQE
VIDKFSENPN QNVLLVQIDA GGFGLNIQAA NRVILCEPQW KPSTENQAIS RAYRMGQNRN
VMVYRLLTKE SVDETMMEII HEKEDIFNTY ANDSVVADAF MNNDSDKEEN EAVMKKKVFQ
IERDRLEKKQ EVVNVSE
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