| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0888 |
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| Symbol | |
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| ID | 4439895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 879870 |
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| End bp | 880607 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672744 |
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| Product | 16S rRNA uridine-516 pseudouridylate synthase related enzyme |
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| Protein accession | YP_814715 |
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| Protein GI | 116629543 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000000000000206154 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGATGAAGG AGAGTAAAAT GGCTGAAAGA TTGCAAAAAG TAATTGCCCA AGCTGGTGTT
GCGTCAAGAC GTAAAGCTGA AAAAATGATT TCAGCTGGAC AAGTAACTGT TAATGGTAAA
AAAATTACCG AACTTGGAAC GAAAGTCGAA CCTAGCGATA AGATTGAAGT AAATGGAGTT
CCAATCGAGA AAGAAACACT CCACACATAT TTGTTTTATA AACCTCGTGG CGTAATTTCT
TCAGTAAAGG ATGACAAGGG AAGAAAGACT GTTGTCGACT TTTTTGAAGA TGTACCATAT
CGTTTATATC CAGTTGGACG TCTTGACTAT GATACTTCTG GCTTATTATT GATGACCAAT
GATGGTGAAT TAGCTAATAA ATTGATGCAC CCTCGTAATG AAGTACCCAA GGTTTATGTA
GCCAAAATTA AAGGACTTCT TTCTCCAGAA GATATCCGTT CCCTTACTCA TGGGGTTCGA
ATTGATGGTC GCAAGAGTGC GCCTGCAAAA TTGAAGATTT TAAAGACTGA TGAAAAGAAA
AATACTCAGA TTGTTCAGTT AACGATTCAT GAAGGTCATT ATCACCAAGT TAAGCGAATG
TTTGAAGCAG TTCATCATTT CGTTGAAAAA TTATCTCGTG AAAAATACGC TTTCTTGACA
TTGAAATCAC TTACTTCAGG CGAATATCGT GAATTGACGC ATGAAGAAGT CTTTCGACTA
AATCACTTAG CTGACTAA
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| Protein sequence | MMKESKMAER LQKVIAQAGV ASRRKAEKMI SAGQVTVNGK KITELGTKVE PSDKIEVNGV
PIEKETLHTY LFYKPRGVIS SVKDDKGRKT VVDFFEDVPY RLYPVGRLDY DTSGLLLMTN
DGELANKLMH PRNEVPKVYV AKIKGLLSPE DIRSLTHGVR IDGRKSAPAK LKILKTDEKK
NTQIVQLTIH EGHYHQVKRM FEAVHHFVEK LSREKYAFLT LKSLTSGEYR ELTHEEVFRL
NHLAD
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