Gene LGAS_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0886 
Symbol 
ID4439893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp878563 
End bp879306 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content34% 
IMG OID639672742 
Producthypothetical protein 
Protein accessionYP_814713 
Protein GI116629541 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.855762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000000000000790722 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAATG CCGATGAATT AACTTTAGAT CTTCCCAATT TTACAGGACC ACTAGATTTA 
CTTTTGCATT TGATTAGATC ACAAAAGATA GATATTTACG ATATTCCAAT TGCGAAGATT
ACTGGGCAAT ACTTAGCTAA TCTAGCTCGC TGGCAGACTT TAGATTTGCA AATTGCTGGC
GAGTATTTTG TGATGGCGTC AACTCTGCTT AGAATTAAAT CGCAATATTT ACTTCCCAAA
AATGATTTTG TAGAGGAAGA CCAATATCAG GAAGATCCGC GTGCTGAATT AGTTGAGCAG
TTAGTTCAAT ATTCGGTTTT TCAAAGAATT GCTGAATATT TCAAAAAGCG TGATGAAGAA
ATGCCAATTA CTGTGGCTAA GGATCCGTCT GTTTCACCAA AAAAGAAAGT TGAGCCACTT
CCCTTAGGAG AAATTACAAG TGATGAGCTT GCTAATACTT TTAAGGTAGT TTTAGAGCGC
TTTAAATTAA GAAAACCACA AGTAGGGCAA ATAGAAGTTC ATGAGGCGTC TATTGAAGAA
ATGACGACAT TTTTGAAGGA TAAACTTCAT CATCGAAAAT CGACTAGTTT TTTTGACTGT
ATTAAAAATT TTCAGGATCT TGATCAAGTA ATTGGTTTGT TTTTAGCAGT TTTAGAATTA
TGTCGTGATC ATAAAATTTT AGTAAAGCAA AATAGAGATT TTGGTGACCT AGAATTAGAG
AAAGTTGAGA CCAATGGCAA GTAA
 
Protein sequence
MNNADELTLD LPNFTGPLDL LLHLIRSQKI DIYDIPIAKI TGQYLANLAR WQTLDLQIAG 
EYFVMASTLL RIKSQYLLPK NDFVEEDQYQ EDPRAELVEQ LVQYSVFQRI AEYFKKRDEE
MPITVAKDPS VSPKKKVEPL PLGEITSDEL ANTFKVVLER FKLRKPQVGQ IEVHEASIEE
MTTFLKDKLH HRKSTSFFDC IKNFQDLDQV IGLFLAVLEL CRDHKILVKQ NRDFGDLELE
KVETNGK