Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0886 |
Symbol | |
ID | 4439893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 878563 |
End bp | 879306 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672742 |
Product | hypothetical protein |
Protein accession | YP_814713 |
Protein GI | 116629541 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.855762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000000000000790722 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAATG CCGATGAATT AACTTTAGAT CTTCCCAATT TTACAGGACC ACTAGATTTA CTTTTGCATT TGATTAGATC ACAAAAGATA GATATTTACG ATATTCCAAT TGCGAAGATT ACTGGGCAAT ACTTAGCTAA TCTAGCTCGC TGGCAGACTT TAGATTTGCA AATTGCTGGC GAGTATTTTG TGATGGCGTC AACTCTGCTT AGAATTAAAT CGCAATATTT ACTTCCCAAA AATGATTTTG TAGAGGAAGA CCAATATCAG GAAGATCCGC GTGCTGAATT AGTTGAGCAG TTAGTTCAAT ATTCGGTTTT TCAAAGAATT GCTGAATATT TCAAAAAGCG TGATGAAGAA ATGCCAATTA CTGTGGCTAA GGATCCGTCT GTTTCACCAA AAAAGAAAGT TGAGCCACTT CCCTTAGGAG AAATTACAAG TGATGAGCTT GCTAATACTT TTAAGGTAGT TTTAGAGCGC TTTAAATTAA GAAAACCACA AGTAGGGCAA ATAGAAGTTC ATGAGGCGTC TATTGAAGAA ATGACGACAT TTTTGAAGGA TAAACTTCAT CATCGAAAAT CGACTAGTTT TTTTGACTGT ATTAAAAATT TTCAGGATCT TGATCAAGTA ATTGGTTTGT TTTTAGCAGT TTTAGAATTA TGTCGTGATC ATAAAATTTT AGTAAAGCAA AATAGAGATT TTGGTGACCT AGAATTAGAG AAAGTTGAGA CCAATGGCAA GTAA
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Protein sequence | MNNADELTLD LPNFTGPLDL LLHLIRSQKI DIYDIPIAKI TGQYLANLAR WQTLDLQIAG EYFVMASTLL RIKSQYLLPK NDFVEEDQYQ EDPRAELVEQ LVQYSVFQRI AEYFKKRDEE MPITVAKDPS VSPKKKVEPL PLGEITSDEL ANTFKVVLER FKLRKPQVGQ IEVHEASIEE MTTFLKDKLH HRKSTSFFDC IKNFQDLDQV IGLFLAVLEL CRDHKILVKQ NRDFGDLELE KVETNGK
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