Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0863 |
Symbol | |
ID | 4439905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 853909 |
End bp | 854556 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639672719 |
Product | hypothetical protein |
Protein accession | YP_814690 |
Protein GI | 116629518 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000438714 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGGAAT TTAATTTGAA AAAGTTAATT GTTGGTGCTT TAAGTTGTGG TCTTTTGTTA CTTGCCGGTT GCCGTAATAA CTTAGTGGAA CCTAAACATA AGTCTTCCGC AGAGGATTAT GCAATCATTC AATCTTCTTC TCATAAAAAG TCACATAAGA AAGTGGAACA ACCTAAAAAG AAGAACGAAG ACAAAAAGAA AAAAGATAAG TCAAAAGATG AAAATAAAAA GATGGATGAT CAAATTGACA CCCTTGATAA AAATGAAACT AACTCAAGCT CAGAAGCTCA AAGTTCCAGT TCAGCTCTTC CATCTTTAAA TAATTCTAAG CGTGAAAGCA GTACTGAAAC CAATAGAAGT TTAAAATCGA ATTTTGGTAC TGCTTTATAC ACTATTCCTC GTCAAAATTA TAGCTACTAT ACTCCAAAAA GTAACTACTA TTACAGTAAT AATTGGTCAA CTAATAATAA TACTGATTCA AGCCATCAAA GTTCAGCTGT AAGTAGCTCA AAATCAGAAC CAAGTACATC AACTTCCAGT TCTTCATCTA GTGATACTTC AACTTCAACC GAAGAAAAAC AATCAACAAC TACTCAAAAT AATGATTCTA ATTCAAACGA ATCAAGTGAA GACGTTCAAA ATGATTAA
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Protein sequence | MEEFNLKKLI VGALSCGLLL LAGCRNNLVE PKHKSSAEDY AIIQSSSHKK SHKKVEQPKK KNEDKKKKDK SKDENKKMDD QIDTLDKNET NSSSEAQSSS SALPSLNNSK RESSTETNRS LKSNFGTALY TIPRQNYSYY TPKSNYYYSN NWSTNNNTDS SHQSSAVSSS KSEPSTSTSS SSSSDTSTST EEKQSTTTQN NDSNSNESSE DVQND
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