Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0822 |
Symbol | dnaK |
ID | 4440001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 804790 |
End bp | 806661 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639672679 |
Product | molecular chaperone DnaK |
Protein accession | YP_814651 |
Protein GI | 116629479 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.762106 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAG TTATTGGTAT TGACTTAGGT ACGACTAACT CAGCTGTTGC CGTACTTGAG GGTAAAGAAC CTAAGATTAT TACTAACCCA GAAGGTAATC GTACAACTCC TTCTGTAGTT GCCTTTAAGA ACGGTGAAAT TCAAGTTGGT GAAGTTGCTA AACGTCAAGC TATCACTAAC CCTAACACCA TTGTTTCAAT TAAGAGTCAT ATGGGTGAAG AAGGTTACAA AGTTAAGGTT GGCGACAAGG AGTATACTCC ACAAGAAATT TCAGCCTTTA TTTTGCAATA CATTAAAAAG TTTTCTGAAG ATTACTTAGG CGAAAAGGTA ACTGATGCAG TTATTACAGT TCCCGCTTAT TTCAATGACG CACAACGTCA AGCTACTAAA GATGCCGGTA AGATTGCTGG TTTAAATGTT CAAAGAATTA TCAACGAACC AACTGCTTCA GCTTTAGCAT ATGGTCTTGA TAAGGATGAA AATGATGAAA AAGTTTTAGT ATACGACCTT GGTGGTGGTA CTTTTGATGT TTCCATCTTG CAATTAGGCG ATGGTGTCTT CCAAGTATTA TCAACTAATG GTGATACTCA CCTTGGTGGT GATGACTTTG ATAAGAGAAT TATGGATTGG TTAATCCAAA ACTTTAAGGA AGAAAATGGC GTTGACTTAT CTAATGATAA GATGGCATTA CAACGTTTAA AGGATGCCGC TGAAAAGGCT AAGAAAGACT TATCTGGCGT TTCATCAACT AACATTTCAC TTCCATTCAT TTCTGCTGGA GAAGCTGGCC CTCTTCACCT TGAAGCTGAT TTAACTCGTG CTAAATTTGA TGAGTTAACT GATGACTTAG TTCAAAAGAC TAAGATTGCT TTTGACAATG CATTGAGTGA TGCTGGATTA AGCGTAAGTG ACATCGACAA AGTTATTTTG AATGGTGGTT CAACTCGTAT TCCTGCAGTT CAAAAAGCTG TTAAGGAATG GGCTGGAAAA GAACCTGACC ACTCAATTAA CCCTGATGAA GCTGTTGCTT TAGGTGCAGC CATTCAAGGT GGTGTTATTT CTGGTGATGT TAAGGATATC GTTTTACTTG ATGTTACTCC ATTATCACTT GGTATTGAAA CTATGGGTGG AGTCTTCACT AAGTTAATTG ATAGAAATAC TACTATCCCA ACTTCAAAGA GCCAAATCTT CTCAACTGCA GCAGATAACC AACCAGCTGT TGATGTTCAC GTTCTTCAAG GTGAACGTCC AATGGCAGCA GATGATAAGA CTTTAGGACG TTTTGAATTA ACTGATATTC CACCAGCACC ACGTGGTGTT CCACAAATTC AAGTTACTTT TGATATCGAC AAGAACGGTA TTGTAAATGT ATCTGCTAAG GATATGGGTA CTGGTAAGGA ACAAAAGATT ACCATTAAGA GTTCTTCTGG TTTATCAGAT GAAGAAATCA AGAAGATGCA AAAGGATGCT GAAGAGCATG CCGAAGAAGA CAAGAAGCGT AAGGAAGAAG TTGATTTACG TAATGAAGTA GATCAATTAA TCTTCACCAC TGAGAAGACT TTGAAGGAAA CTAAGGGTAA AGTTCCTGAA ACTGAAACCA AGAATGTTCA AGATGCTTTG GATGCTTTAA AGAAAGCTCA AAAAGATAAT AACTTGGATG AAATGAAGGA AAAGAAAGAA GCTTTATCAA AGGCTGCCCA AGATTTAGCT GTTAAACTTT ACCAACAAAA TGGTGGTGCT CAAGGTGCTG CTGGTCAAGC AGGTCCTCAA GGAGCACAAG GTGGTCAACC AAACAATGAT AACGGCTCAA GCAACGGTCA AGGTGGTTCA ACTGTTGATG GAGATTTTCA CAAGGTAGAC CCTGATAAGT AA
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Protein sequence | MSKVIGIDLG TTNSAVAVLE GKEPKIITNP EGNRTTPSVV AFKNGEIQVG EVAKRQAITN PNTIVSIKSH MGEEGYKVKV GDKEYTPQEI SAFILQYIKK FSEDYLGEKV TDAVITVPAY FNDAQRQATK DAGKIAGLNV QRIINEPTAS ALAYGLDKDE NDEKVLVYDL GGGTFDVSIL QLGDGVFQVL STNGDTHLGG DDFDKRIMDW LIQNFKEENG VDLSNDKMAL QRLKDAAEKA KKDLSGVSST NISLPFISAG EAGPLHLEAD LTRAKFDELT DDLVQKTKIA FDNALSDAGL SVSDIDKVIL NGGSTRIPAV QKAVKEWAGK EPDHSINPDE AVALGAAIQG GVISGDVKDI VLLDVTPLSL GIETMGGVFT KLIDRNTTIP TSKSQIFSTA ADNQPAVDVH VLQGERPMAA DDKTLGRFEL TDIPPAPRGV PQIQVTFDID KNGIVNVSAK DMGTGKEQKI TIKSSSGLSD EEIKKMQKDA EEHAEEDKKR KEEVDLRNEV DQLIFTTEKT LKETKGKVPE TETKNVQDAL DALKKAQKDN NLDEMKEKKE ALSKAAQDLA VKLYQQNGGA QGAAGQAGPQ GAQGGQPNND NGSSNGQGGS TVDGDFHKVD PDK
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