Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0819 |
Symbol | |
ID | 4439998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 802358 |
End bp | 802984 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639672676 |
Product | hypothetical protein |
Protein accession | YP_814648 |
Protein GI | 116629476 |
COG category | [S] Function unknown |
COG ID | [COG4832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000000589024 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.37029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTG ATTATAAAAA AGAATATAAA AATTTGTATC ATCCTAAAAA GCAGCCTGAA ATTATTAGGG TCCCTAAAAT GAATTATATT GCAGTTTCAG GAAGTGGAGA CCCTAATCAG GAAGATGGGA CTTATCAAAA GGCTTTAGGA TTACTTTATG GACTTGCTTA TACTATCAAG ATGAGTAAAA AAGGTGAGCA TAAAATTCCA GGATACTTCG ATTATGTAGT GCCACCACTT GAAGGATTAT GGTGGTCAAA AGATCAGCAG AAGATTGATT ATGCTCATAA AGAAAATTTT GCCTGGATAT CAATGATTCG ATTGCCGGAT TTTGTTACAA AGAAAGAATT TGATTGGGCA ATTAAGACAG CTACTGAGAA GAAAAAACAA GATTTCTCTC AAGCCAAATT TTTTACTTAT GATGAGGGAC TTTGTGTTCA GATAATGCAC ACCGGTAGTT ATGATAATGA GCCTGCCACA ATTGAAGAGA TGCATCAATT TGTAAAAAAA GAAAATTATC AGATAGATAT TCAAAATCCA CGTTATCATC ATGAAATATA TTTAAGCGAT CCAAGAAGAA CTAAGACTGA AAGGCTTAAA ACTGTAATTA GATTACCAAT TAAATAA
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Protein sequence | MAFDYKKEYK NLYHPKKQPE IIRVPKMNYI AVSGSGDPNQ EDGTYQKALG LLYGLAYTIK MSKKGEHKIP GYFDYVVPPL EGLWWSKDQQ KIDYAHKENF AWISMIRLPD FVTKKEFDWA IKTATEKKKQ DFSQAKFFTY DEGLCVQIMH TGSYDNEPAT IEEMHQFVKK ENYQIDIQNP RYHHEIYLSD PRRTKTERLK TVIRLPIK
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