| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0816 |
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| Symbol | truB |
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| ID | 4439995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 798733 |
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| End bp | 799626 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672673 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_814645 |
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| Protein GI | 116629473 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0170651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.0612098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAATG GAATTGTAGT AGTAAATAAG CCACGTGGAG TAACAAGCAG TGATTGTGTT
TATAAATTAA GAAAGATACT TCAAATTAGA AAAATCGGAC ATGCTGGGAC GCTTGATCCT
GAAGTTAATG GCGTATTACC AATTGCTATT GGTCAAGCGA CGAAATTGAT TGAATTAATG
CATGAAAAAC CTAAATCCTA TATTGGAAGC GGAATGTTTG GGCGAGCTAC TGATAGTTAT
GATTTAGATG GTAAAACTAT TGCTGAAGAA AAAATAAATA CTCCGTTTAC AAGTAATGAA
ATTATTGCTG GCATGGAAAA GTTGACAGGA AAGCTTGAGC AAGTACCGCC AATTTATTCA
GCTGTAAGAG TAAATGGTAA AAGGCTTTAT GAATATGCTC GGGAAAATAT TCCAGTTGAA
CGTCCCAAGC GAAAAGTCAA TGTTTATAGC TATGAATTAA CACAAGATCC AGAATATGAT
CCATTGGAAA AAACAGAAAG CTTTAATTTT GCAATTCGCT GTTCTAAAGG AACCTATGTC
AGGTCATTAG TAAATGATTT AGGTGAAGAA TTAGGTGTAC CTGCTGTAAT GACTAGTCTT
ACGCGAACTA GTAGTTCAGG CTATGACTTA AATCAAGCTG TAGATTTAGA AACAATTGAA
GCAGAAATAG ATACTCCAGG AAAATGGCTT CAGCCAATTG ATAGCTTTTT TGCTGAATTA
CCTCAACTTC AACTTTCGCC AGATCAATTT AAACGGGTTT CAAACGGTGC AAGCATTAGT
TTAAATACCA GTTATGCTAA GGTCGCTTTG GTTTATAATG GTCATATAAA AGCTATTTAT
CGGCGACAAG GAAAAATCTA TCGCCCTGAG ATGATGCTTT TAAAAAATGA ATAG
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| Protein sequence | MLNGIVVVNK PRGVTSSDCV YKLRKILQIR KIGHAGTLDP EVNGVLPIAI GQATKLIELM
HEKPKSYIGS GMFGRATDSY DLDGKTIAEE KINTPFTSNE IIAGMEKLTG KLEQVPPIYS
AVRVNGKRLY EYARENIPVE RPKRKVNVYS YELTQDPEYD PLEKTESFNF AIRCSKGTYV
RSLVNDLGEE LGVPAVMTSL TRTSSSGYDL NQAVDLETIE AEIDTPGKWL QPIDSFFAEL
PQLQLSPDQF KRVSNGASIS LNTSYAKVAL VYNGHIKAIY RRQGKIYRPE MMLLKNE
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