Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0814 |
Symbol | infB |
ID | 4439993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 795642 |
End bp | 798290 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639672671 |
Product | translation initiation factor IF-2 |
Protein accession | YP_814643 |
Protein GI | 116629471 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.0318288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATGGCTA AAAAGCGTAT TTATGAAGTA GCGAAAGAAT TAGGCATTGA AAACAAAATT GTTGTAAAAA AGGCACAAGA TTTGGGTTTT GATGTAAAGA GCCACATGTC CTCCCTAGAT GATAAGCAAG TCTCTAAGTT AGTAGATAGT TTTAAGTCTG CTAATACTAC TAAGCCATCT ACTGAAAAGG ATTCGAAAAA TTCAAGTCGT AAAGAAAAAA CAAAAATAAA GGTTTCTGTA GGTGCAATTC GTCGTCGTGA TAATAAAAAT GATCACGATA ATCGCCATGG TAATAATAAA CGCAGAAACA ATAAATTTAA AAAACAACAA AATGATCGTC GTGCTGAACG AAATAAACCG CAAACAGAAG CTAAATCTGC AGCACGTGAT TTATTGAATA AATTTAAGAA AAAGCAACGA GCTGAAGCTA GTGAATTAAA CGCTCAGACT GAAGCTTCCC GCCGTAAATG GCATCAAGAA CAAAATCCTC AAAGATCAAA GGTTAAAAAA GTGGAAAATA CTCGTAAGCC AAAAGAAGAA AAACTTGAAG GAGCTGCAGC TGTTAAAGCT CGTGTACAAG CTTCACAAAA ACCAGTTGGT CCAAAGATTA TTAAACCATC GCCGGCAAGA AATAAGGCAA AGAGACCTAC TGTGAAGAAG GTAGAACCAA TTGCTCCAGT TGTACCTGCT CCTCAAAAAG AAGAAACAAA ACCAACTCGC AAAAAAGACT TTACTCGTAA GAAACGTGAA GTGCCAGATT ATGAACGCGA AAGAAGCGAA CATTCTGATA AGGCACGTCG CCGTAGAAAT AAGAAAAATA AGCGTATTAA TCAAAGTAAA GAAATTAAAA AGCAACCAAC GCAAAGAAAG GAACGTCCAT TGCCAGAAAC ATTGGTTTAT GAAGAAGGCA TGAATGCTCA AGATTTAGGA AAACTTCTTC ATAGGGAGCC TGCTGAAATT GTTAAGAAGC TCTTTATGCT TGGTGTCATG ACTAACCAAA ATCAGTCTTT GGACAAAGAT ACTATTGAAC TCCTAGCAGC TGAATATGGT ATTGAAGCAC AAGAAAAAGT GCATGAAGAT ATTTCAGATA TTGATACTTT GTACACTAAA GAAATGGAAG AATCAAAAGC TTCTAAGCAT CAAGAAAAGC GTCCTCCAGT TGTTACAATC ATGGGTCACG TTGACCATGG GAAGACCACT TTACTTGATA GATTACGTCA TACTAATGTT TCTGAACATG AAGCAGGTGG TATTACTCAA AAGATTGGTG CTTACCAAGT ACGAATCGAT GATCGTTTGA TTACTTTCTT AGATACTCCA GGACACGCAG CCTTTTCTAA CATGCGTGCT CGCGGTGCTG AAATTACTGA CATTGTTGTT TTAGTAGTTG CAGCAGATGA TGGTGTAATG CCACAAACAA TTGAAGCTAT TGACCATGCT AAGAGTGCTG GTGTGCCAAT TATCGTTGCT GTTAACAAGA TTGATAAGCC AGGTGCAAAT CCAGATCATG TAATGGAACA ACTTATGAAA TATGGCTTAG TTCCTGAAGA CTGGGGCGGC GATACAATCT TTGTTAAGAT TTCTGCTAAG ACAGGTAAAA ATGTTGAAGA ACTCTTGCAA ATGATCTTGC TTCAAGCCGA TGTTATGGAA CTTAAAGCTG ATCCTGATCA AAAGGCGATT GGTACTGTAA TTGAAGCTCG TCTTGATAAA GGACGCGGTT CAGTTGCCGA TGTTTTGGTT CAACAAGGTA CTTTGAAGGT TGGAGATCCA ATTGTTGTTG GCGATACGTT TGGTCGTGTT CGTGTTATGA CTAACGATAA GGGACGTAGA GTCAAAAAGG CAACTCCATC TGCTCCTGTT GAAATTACTG GATTGAATGA TGTTCCAGAA GCAGCTGATA AGTTAGTAGT CTTTGAAGAT GAAAAGACAG CTAGAAGTGT TGGTGAGCAA CGCGCTAAGA ATGCTTTAGA GAAACAACGT GAGAATGTCC AACATGTTAC TTTGGATAAT TTGTTTGACA CAATGAAGAA AGAAAACATG AAGGAAGTTG ACATCGTTCT TAAGGCCGAT GTTCAAGGTT CAGCTGAAGC ATTGCAACAA TCTCTTGAAA AGATTGAAGT TGAAGGCGTA AGAGTTAACA TTATTCACTC TGGTGTTGGT GCAATCAATG AATCTGATGT TACCTTAGCT GGTGCTTCAA ATGCATTTAT TGTTGGATTT AATGTTAGAC CAACTAATAC TGCTAAGAGT CAAGCAGATG CTGAAGGTGT AGATATTCGT CTTTATAACA TTATTTACAA GGTTATGGAC GATGTTGAAG CTGCTATGAA GGGTATGCTT GAACCTACAT ACGAAGAAAA GGTTACTGGA AACTTAACTG TACGTGAAAC TTGGAAGGTA TCTAAGATCG GAACAATTGC TGGTGCTTTT GTTGATAATG GATATGTTAC TAGAGATTCC GGTATCCGTG TAATTCGTGA CGGTATTGTT AAATATGATG GAAAAGTTGC ATCTCTTAAG CGTTTCAAGG ATGACGTTAA GGAAGTTAAG CAAGGATTCG ATTGTGGTAT CACCATTGAA AACTTCAATG ATATCAAGGT TGACGATCAA CTTGAAGCCT ACGAAATGCA AGAGGTACCT GTTAAATAG
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Protein sequence | MMAKKRIYEV AKELGIENKI VVKKAQDLGF DVKSHMSSLD DKQVSKLVDS FKSANTTKPS TEKDSKNSSR KEKTKIKVSV GAIRRRDNKN DHDNRHGNNK RRNNKFKKQQ NDRRAERNKP QTEAKSAARD LLNKFKKKQR AEASELNAQT EASRRKWHQE QNPQRSKVKK VENTRKPKEE KLEGAAAVKA RVQASQKPVG PKIIKPSPAR NKAKRPTVKK VEPIAPVVPA PQKEETKPTR KKDFTRKKRE VPDYERERSE HSDKARRRRN KKNKRINQSK EIKKQPTQRK ERPLPETLVY EEGMNAQDLG KLLHREPAEI VKKLFMLGVM TNQNQSLDKD TIELLAAEYG IEAQEKVHED ISDIDTLYTK EMEESKASKH QEKRPPVVTI MGHVDHGKTT LLDRLRHTNV SEHEAGGITQ KIGAYQVRID DRLITFLDTP GHAAFSNMRA RGAEITDIVV LVVAADDGVM PQTIEAIDHA KSAGVPIIVA VNKIDKPGAN PDHVMEQLMK YGLVPEDWGG DTIFVKISAK TGKNVEELLQ MILLQADVME LKADPDQKAI GTVIEARLDK GRGSVADVLV QQGTLKVGDP IVVGDTFGRV RVMTNDKGRR VKKATPSAPV EITGLNDVPE AADKLVVFED EKTARSVGEQ RAKNALEKQR ENVQHVTLDN LFDTMKKENM KEVDIVLKAD VQGSAEALQQ SLEKIEVEGV RVNIIHSGVG AINESDVTLA GASNAFIVGF NVRPTNTAKS QADAEGVDIR LYNIIYKVMD DVEAAMKGML EPTYEEKVTG NLTVRETWKV SKIGTIAGAF VDNGYVTRDS GIRVIRDGIV KYDGKVASLK RFKDDVKEVK QGFDCGITIE NFNDIKVDDQ LEAYEMQEVP VK
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