Gene LGAS_0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0814 
SymbolinfB 
ID4439993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp795642 
End bp798290 
Gene Length2649 bp 
Protein Length882 aa 
Translation table11 
GC content38% 
IMG OID639672671 
Producttranslation initiation factor IF-2 
Protein accessionYP_814643 
Protein GI116629471 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0318288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATGGCTA AAAAGCGTAT TTATGAAGTA GCGAAAGAAT TAGGCATTGA AAACAAAATT 
GTTGTAAAAA AGGCACAAGA TTTGGGTTTT GATGTAAAGA GCCACATGTC CTCCCTAGAT
GATAAGCAAG TCTCTAAGTT AGTAGATAGT TTTAAGTCTG CTAATACTAC TAAGCCATCT
ACTGAAAAGG ATTCGAAAAA TTCAAGTCGT AAAGAAAAAA CAAAAATAAA GGTTTCTGTA
GGTGCAATTC GTCGTCGTGA TAATAAAAAT GATCACGATA ATCGCCATGG TAATAATAAA
CGCAGAAACA ATAAATTTAA AAAACAACAA AATGATCGTC GTGCTGAACG AAATAAACCG
CAAACAGAAG CTAAATCTGC AGCACGTGAT TTATTGAATA AATTTAAGAA AAAGCAACGA
GCTGAAGCTA GTGAATTAAA CGCTCAGACT GAAGCTTCCC GCCGTAAATG GCATCAAGAA
CAAAATCCTC AAAGATCAAA GGTTAAAAAA GTGGAAAATA CTCGTAAGCC AAAAGAAGAA
AAACTTGAAG GAGCTGCAGC TGTTAAAGCT CGTGTACAAG CTTCACAAAA ACCAGTTGGT
CCAAAGATTA TTAAACCATC GCCGGCAAGA AATAAGGCAA AGAGACCTAC TGTGAAGAAG
GTAGAACCAA TTGCTCCAGT TGTACCTGCT CCTCAAAAAG AAGAAACAAA ACCAACTCGC
AAAAAAGACT TTACTCGTAA GAAACGTGAA GTGCCAGATT ATGAACGCGA AAGAAGCGAA
CATTCTGATA AGGCACGTCG CCGTAGAAAT AAGAAAAATA AGCGTATTAA TCAAAGTAAA
GAAATTAAAA AGCAACCAAC GCAAAGAAAG GAACGTCCAT TGCCAGAAAC ATTGGTTTAT
GAAGAAGGCA TGAATGCTCA AGATTTAGGA AAACTTCTTC ATAGGGAGCC TGCTGAAATT
GTTAAGAAGC TCTTTATGCT TGGTGTCATG ACTAACCAAA ATCAGTCTTT GGACAAAGAT
ACTATTGAAC TCCTAGCAGC TGAATATGGT ATTGAAGCAC AAGAAAAAGT GCATGAAGAT
ATTTCAGATA TTGATACTTT GTACACTAAA GAAATGGAAG AATCAAAAGC TTCTAAGCAT
CAAGAAAAGC GTCCTCCAGT TGTTACAATC ATGGGTCACG TTGACCATGG GAAGACCACT
TTACTTGATA GATTACGTCA TACTAATGTT TCTGAACATG AAGCAGGTGG TATTACTCAA
AAGATTGGTG CTTACCAAGT ACGAATCGAT GATCGTTTGA TTACTTTCTT AGATACTCCA
GGACACGCAG CCTTTTCTAA CATGCGTGCT CGCGGTGCTG AAATTACTGA CATTGTTGTT
TTAGTAGTTG CAGCAGATGA TGGTGTAATG CCACAAACAA TTGAAGCTAT TGACCATGCT
AAGAGTGCTG GTGTGCCAAT TATCGTTGCT GTTAACAAGA TTGATAAGCC AGGTGCAAAT
CCAGATCATG TAATGGAACA ACTTATGAAA TATGGCTTAG TTCCTGAAGA CTGGGGCGGC
GATACAATCT TTGTTAAGAT TTCTGCTAAG ACAGGTAAAA ATGTTGAAGA ACTCTTGCAA
ATGATCTTGC TTCAAGCCGA TGTTATGGAA CTTAAAGCTG ATCCTGATCA AAAGGCGATT
GGTACTGTAA TTGAAGCTCG TCTTGATAAA GGACGCGGTT CAGTTGCCGA TGTTTTGGTT
CAACAAGGTA CTTTGAAGGT TGGAGATCCA ATTGTTGTTG GCGATACGTT TGGTCGTGTT
CGTGTTATGA CTAACGATAA GGGACGTAGA GTCAAAAAGG CAACTCCATC TGCTCCTGTT
GAAATTACTG GATTGAATGA TGTTCCAGAA GCAGCTGATA AGTTAGTAGT CTTTGAAGAT
GAAAAGACAG CTAGAAGTGT TGGTGAGCAA CGCGCTAAGA ATGCTTTAGA GAAACAACGT
GAGAATGTCC AACATGTTAC TTTGGATAAT TTGTTTGACA CAATGAAGAA AGAAAACATG
AAGGAAGTTG ACATCGTTCT TAAGGCCGAT GTTCAAGGTT CAGCTGAAGC ATTGCAACAA
TCTCTTGAAA AGATTGAAGT TGAAGGCGTA AGAGTTAACA TTATTCACTC TGGTGTTGGT
GCAATCAATG AATCTGATGT TACCTTAGCT GGTGCTTCAA ATGCATTTAT TGTTGGATTT
AATGTTAGAC CAACTAATAC TGCTAAGAGT CAAGCAGATG CTGAAGGTGT AGATATTCGT
CTTTATAACA TTATTTACAA GGTTATGGAC GATGTTGAAG CTGCTATGAA GGGTATGCTT
GAACCTACAT ACGAAGAAAA GGTTACTGGA AACTTAACTG TACGTGAAAC TTGGAAGGTA
TCTAAGATCG GAACAATTGC TGGTGCTTTT GTTGATAATG GATATGTTAC TAGAGATTCC
GGTATCCGTG TAATTCGTGA CGGTATTGTT AAATATGATG GAAAAGTTGC ATCTCTTAAG
CGTTTCAAGG ATGACGTTAA GGAAGTTAAG CAAGGATTCG ATTGTGGTAT CACCATTGAA
AACTTCAATG ATATCAAGGT TGACGATCAA CTTGAAGCCT ACGAAATGCA AGAGGTACCT
GTTAAATAG
 
Protein sequence
MMAKKRIYEV AKELGIENKI VVKKAQDLGF DVKSHMSSLD DKQVSKLVDS FKSANTTKPS 
TEKDSKNSSR KEKTKIKVSV GAIRRRDNKN DHDNRHGNNK RRNNKFKKQQ NDRRAERNKP
QTEAKSAARD LLNKFKKKQR AEASELNAQT EASRRKWHQE QNPQRSKVKK VENTRKPKEE
KLEGAAAVKA RVQASQKPVG PKIIKPSPAR NKAKRPTVKK VEPIAPVVPA PQKEETKPTR
KKDFTRKKRE VPDYERERSE HSDKARRRRN KKNKRINQSK EIKKQPTQRK ERPLPETLVY
EEGMNAQDLG KLLHREPAEI VKKLFMLGVM TNQNQSLDKD TIELLAAEYG IEAQEKVHED
ISDIDTLYTK EMEESKASKH QEKRPPVVTI MGHVDHGKTT LLDRLRHTNV SEHEAGGITQ
KIGAYQVRID DRLITFLDTP GHAAFSNMRA RGAEITDIVV LVVAADDGVM PQTIEAIDHA
KSAGVPIIVA VNKIDKPGAN PDHVMEQLMK YGLVPEDWGG DTIFVKISAK TGKNVEELLQ
MILLQADVME LKADPDQKAI GTVIEARLDK GRGSVADVLV QQGTLKVGDP IVVGDTFGRV
RVMTNDKGRR VKKATPSAPV EITGLNDVPE AADKLVVFED EKTARSVGEQ RAKNALEKQR
ENVQHVTLDN LFDTMKKENM KEVDIVLKAD VQGSAEALQQ SLEKIEVEGV RVNIIHSGVG
AINESDVTLA GASNAFIVGF NVRPTNTAKS QADAEGVDIR LYNIIYKVMD DVEAAMKGML
EPTYEEKVTG NLTVRETWKV SKIGTIAGAF VDNGYVTRDS GIRVIRDGIV KYDGKVASLK
RFKDDVKEVK QGFDCGITIE NFNDIKVDDQ LEAYEMQEVP VK