Gene LGAS_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0810 
Symbol 
ID4439989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp793261 
End bp793779 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content38% 
IMG OID639672667 
Producthypothetical protein 
Protein accessionYP_814639 
Protein GI116629467 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0615439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.00120973 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCAGTA ATGCTCACTC TTTTTATTAC GGAGGAAGAG ATTTGACAAA GGTTACCGAA 
TTGGTGGCAG ACGTAGTTAC GCCTTTAGCT GAAGCAAGAG GTGATGAACT GGTCGATGTT
GAATATGTAA AGGAAAAGAA GCAATATTAT CTTCGCATTT ATGTTGATCG TCGCCCAGGC
GGAATCGATA TTGAAGAGAT CGCAAATTTG AGTGAATTGG TATCAGAAAA GCTAGATGAA
TTAGATCCTG ATCCTTTTCC TGAGCCGTAT ATTTTAGAGC TTTCATCTCC TGGTTTAGAG
CGTCCAATTA AAAATGAAAA AGATTGGGAG CGCGCCAAAG GATCATACAT TCATGTTAGT
CTTTATCAAA AAATTGATGG AGAAAAGACT TATGAAGGTA CTTTAAAAGA TCTCAATCAA
AATCAGATCG TCTTAGAAGT AAAGATCAAA ACACGACGCA AAGAAATAAC AATTCCTCGA
AAGGTAATTG CTTCTAGTCG CTTTGCAGTT GAATTTTAG
 
Protein sequence
MSSNAHSFYY GGRDLTKVTE LVADVVTPLA EARGDELVDV EYVKEKKQYY LRIYVDRRPG 
GIDIEEIANL SELVSEKLDE LDPDPFPEPY ILELSSPGLE RPIKNEKDWE RAKGSYIHVS
LYQKIDGEKT YEGTLKDLNQ NQIVLEVKIK TRRKEITIPR KVIASSRFAV EF