Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0805 |
Symbol | |
ID | 4440019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 784372 |
End bp | 785091 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672662 |
Product | undecaprenyl pyrophosphate synthase |
Protein accession | YP_814634 |
Protein GI | 116629462 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000655328 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0000000226437 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGAAT CAAAAAAATC ACTTAATCAT TTAGCCATAA TTATGGACGG TAATGGCAGA TGGGCAAAAA AAAGAAATTT ACTTCGGTTT GTTGGTCATC GTCATGGAAT GGATAATATT CGAAATATTG CTCTAGCAGC AAATGAGATG GGAATCAAAG TCTTAACTCT CTATGCCTTT TCAACTGAGA ATTGGGCAAG ACCCACGGAT GAAGTAAATT ATTTGATGCG TTTGCCAATT GACTTTTTTG ATAAGTTTAT GCCTGAATTA ATGGAAAATA ATGTTCGGGT AAATATCATG GGCTTTTTAG ATGAATTACC TGAGAAGACT TATCTAGTAA CACAAAAGGC AATGGCAGAA ACGGCTAATA ATACCGGTAT GGTCTTAAAT TTTGCCTTTA ATTATGGATC TCGACGTGAG ATAACTGCTG GTGTCCAAGA AATTGCTCGT CAAGTAAAAG CAGGAAAAAT AAATCCTAGT GATATTGATG AAAAGATGGT TTCTGATCAT TTATTAACTC ATTCCTTAAC TCCATATGAC GATCCTGATT TATTGATTAG AACCTCAGGA GAGGAACGTT TATCAAATTT CTTGTTATGG CAGATGGCCT ATACTGAATT TAGTTTTTCA AATAAATTAT GGCCAGATTT TGATAAAAAT GATTTGGAAA ACTTAGTTAA AGATTACTAC GGACGTAATC GTCGATTTGG AAAATTGTAA
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Protein sequence | MSESKKSLNH LAIIMDGNGR WAKKRNLLRF VGHRHGMDNI RNIALAANEM GIKVLTLYAF STENWARPTD EVNYLMRLPI DFFDKFMPEL MENNVRVNIM GFLDELPEKT YLVTQKAMAE TANNTGMVLN FAFNYGSRRE ITAGVQEIAR QVKAGKINPS DIDEKMVSDH LLTHSLTPYD DPDLLIRTSG EERLSNFLLW QMAYTEFSFS NKLWPDFDKN DLENLVKDYY GRNRRFGKL
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