Gene LGAS_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0805 
Symbol 
ID4440019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp784372 
End bp785091 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content34% 
IMG OID639672662 
Productundecaprenyl pyrophosphate synthase 
Protein accessionYP_814634 
Protein GI116629462 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000655328 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0000000226437 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGAAT CAAAAAAATC ACTTAATCAT TTAGCCATAA TTATGGACGG TAATGGCAGA 
TGGGCAAAAA AAAGAAATTT ACTTCGGTTT GTTGGTCATC GTCATGGAAT GGATAATATT
CGAAATATTG CTCTAGCAGC AAATGAGATG GGAATCAAAG TCTTAACTCT CTATGCCTTT
TCAACTGAGA ATTGGGCAAG ACCCACGGAT GAAGTAAATT ATTTGATGCG TTTGCCAATT
GACTTTTTTG ATAAGTTTAT GCCTGAATTA ATGGAAAATA ATGTTCGGGT AAATATCATG
GGCTTTTTAG ATGAATTACC TGAGAAGACT TATCTAGTAA CACAAAAGGC AATGGCAGAA
ACGGCTAATA ATACCGGTAT GGTCTTAAAT TTTGCCTTTA ATTATGGATC TCGACGTGAG
ATAACTGCTG GTGTCCAAGA AATTGCTCGT CAAGTAAAAG CAGGAAAAAT AAATCCTAGT
GATATTGATG AAAAGATGGT TTCTGATCAT TTATTAACTC ATTCCTTAAC TCCATATGAC
GATCCTGATT TATTGATTAG AACCTCAGGA GAGGAACGTT TATCAAATTT CTTGTTATGG
CAGATGGCCT ATACTGAATT TAGTTTTTCA AATAAATTAT GGCCAGATTT TGATAAAAAT
GATTTGGAAA ACTTAGTTAA AGATTACTAC GGACGTAATC GTCGATTTGG AAAATTGTAA
 
Protein sequence
MSESKKSLNH LAIIMDGNGR WAKKRNLLRF VGHRHGMDNI RNIALAANEM GIKVLTLYAF 
STENWARPTD EVNYLMRLPI DFFDKFMPEL MENNVRVNIM GFLDELPEKT YLVTQKAMAE
TANNTGMVLN FAFNYGSRRE ITAGVQEIAR QVKAGKINPS DIDEKMVSDH LLTHSLTPYD
DPDLLIRTSG EERLSNFLLW QMAYTEFSFS NKLWPDFDKN DLENLVKDYY GRNRRFGKL