Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0801 |
Symbol | rpsB |
ID | 4440015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 781083 |
End bp | 781898 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639672658 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_814630 |
Protein GI | 116629458 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000000778728 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 8.51058e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAGAGGAA TTAACCAGGA GGAATTTTTT ATGACAGTTG TTACTATGAA GCAATTGCTT GAAGCAGGTG TCCACTTTGG TCACCAAACT AGAAGATGGG ATCCAAAGAT GGCTCCTTAC ATTTTCACTC AAAGAAACGG AATCTACATC ATTGACTTGC AAAAGACTAT CAGGATGTTA GATGACGCTT ACAACTACGT TAAGGCAGTT GCTCAAGACG GCGGTGTATT CTTATTCGTT GGTACTAAGA AGCAAGCACA GGACGCTGTT AAAGAAGAAG CTACACGTGC AGGTCAATAC TATGTTAACC AACGTTGGTT AGGTGGTACT TTGACTAACT GGACTACTAT CCAAAGCCGT GTTAAGAGAT TAAAGCAATT AAAAGAAATG TCAGAAGACG GCACTTTCGA TGTATTACCA AAGAAGGAAG TTGCTCTTTT GACTAAGGAA ATGGAAAAAC TTGAAAGATT CTTAGGTGGT ATCGAAGATA TGCCTAGAAT TCCAGATGTT ATGTTTGTTG TTGATCCTAA GAAAGAAAAG ATCGCTGTTC ACGAAGCAAA CATTTTAGGT ATCCCTGTAG TAGCTATGGT TGATACTAAC ACTGATCCAG ATCCAATCGA CGTTGTTATT CCTGCAAACG ACGATGCAAT TCGTGCAATT CGTTTAATTT CAGGTGCTAT GGCTGACGCA ATTATCGAAG GTAAGCAAGG TCAAGATGAC AGCGAAGACG TTGAAAAAGA AATGGCTGAC AAAGCTGCAG CTGAAAACGA TGACGAAGAA TCTATCGAAG AAGTTGTAGA AAAATCAGAA GACTAA
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Protein sequence | MRGINQEEFF MTVVTMKQLL EAGVHFGHQT RRWDPKMAPY IFTQRNGIYI IDLQKTIRML DDAYNYVKAV AQDGGVFLFV GTKKQAQDAV KEEATRAGQY YVNQRWLGGT LTNWTTIQSR VKRLKQLKEM SEDGTFDVLP KKEVALLTKE MEKLERFLGG IEDMPRIPDV MFVVDPKKEK IAVHEANILG IPVVAMVDTN TDPDPIDVVI PANDDAIRAI RLISGAMADA IIEGKQGQDD SEDVEKEMAD KAAAENDDEE SIEEVVEKSE D
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