| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0796 |
|---|
| Symbol | |
|---|
| ID | 4440010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 774411 |
|---|
| End bp | 776177 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639672653 |
|---|
| Product | ABC-type multidrug transport system, ATPase and permease component |
|---|
| Protein accession | YP_814625 |
|---|
| Protein GI | 116629453 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000122761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 1.16631e-21 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTT TCAGCAAATT GGGCTGGTTT TTTAAGCAAG AAAAAAAGAG ATATATTATT
GGAATTAGTT TTTTGGCTTT AACTTCGATC GCAAATTTAG TACCTCCGAG AATTTTAGGA
TTGATGGCGG ATCAACTAGA TAAGGGATCA ATTAGTTGGG GCGAATACGG CGCTCTAATT
TTAGCGGTTG TTGCAGCTGC AATTGTTTTG TATTTATTAC GTTACTTTTG GCGTAAGCAG
ATTTGGGGTG GTGCTGCTGA ATTAGAAAGG CAAATGCGGT CACGTTTATT TAAACATTTT
ATGGTAATGG ATCGAACTTT TTATCAAAGA CACCGGACTG GTGACTTGAT GGCGCATGCA
ACAAATGATA TTAATTCTAT TCAAAATGTT GCGGGAGACG GTATTTTAAC TTTAGTCGAC
TCATTAGTCA CTGGTGGAAC AACGATGATT GCAATGATTA TCTTTACAGA CTTTCGCTTA
ACAATTATTG CACTTTTGCC GCTTCCTTTT CTTGCTTTAG GTGCTTGGAA ATTAGGAGAT
AAACTTCATT ATAGTTTTGA TAAGTCACAG GCGGCATTTT CTCGTTTAAA TAATAAAACT
CAAGAATCTG TTTCTGGAAT TAAAGTATTG AAAGCATTTG GCGAAAGTAA GCAGGATTCT
GCCGCCTTTA ACAAAATGGT AGATGAAACT ATTCAGATCA ATAAGAAAGT TTTTAAATGG
GATTCAATGT TTGATCCACT AGGAACCTTA ATTATTGGGG CCACTTATGT AATTACAATT
ATTTATGGTG GTTTATTAGT AACAAATCAT ACTTTATCGG TCGGACAGTT AGTCTCATTT
ATTGCTTATA TTTCCAATAT GGTTTGGCCA ATGTTTGCGA TTGGTTATTT ATTTAATATT
TTAGAAAGAG GATCAGCTTC TTATGATCGT GTTGAACGTC TCTTATATGA AAGACCGCAA
ATTACAGATG AAAACGCTGA TCAAAGTTTA ACGGCTAAAG ATATTCAAGG TGATCTGAAA
TATGATATTC AATCTTTTTC TTATCCTGAT GAAAAGGAAA TACCCGTCTT ACAAAATATT
GATTTCACCT TAAAACCAGG ACAAACATTA GGATTAGTTG GTAAGGTTGG AGCTGGTAAA
ACTACAATTA TTGAGCTTTT ACTTAGAGAA TTCGATCGCT ATCAGGGCAA AATAACTTTA
GGCGGACATG ACATTCGAAA TATTCCGCTA AAATTATTGT TAAATGAAAT TTCTTATGTA
CCGCAGAATA ACTTTTTATT TTCTACTTCA ATTGAAAAGA ATATTGCATT TTCAGATCAA
GACGCAGCTA AAAGTAAAAT AGAATCTGCA GCTCAAAAGA GTGATTTACA TGATGATATT
ATGCAGATGC CAGCGGGTTA TCAAACTTTA GTTGGAGAAA ACGGTGTTTC CTTGTCTGGT
GGACAAAAGC AACGGTTATC AATTGCTAGA GCATTATTAA AAGAAAGTCC GATTTTGATT
TTGGACGATG CTCTTTCAGC AGTTGATGCG AAAACAGAAA CTGCTATTTT GGATTCACTT
AGATCTGAGA GAAAAGGAAA AAAGACATTG ATTGCGGCAC ACCGTTTAAC TTCAGTAATG
GATGCTGATT TAATTCTAGT TCTAAAGAAT GGAAAAATTG TTGAAAGAGG AAAGCATGAT
GAGCTACTGG CCCAAGATGG TTGGTATGCT GAAATGTGGC GTAAACAAGA ATTACAAGCA
AAGGTGGGTG AAGTAGATGG GCAATAA
|
|---|
| Protein sequence | MNIFSKLGWF FKQEKKRYII GISFLALTSI ANLVPPRILG LMADQLDKGS ISWGEYGALI
LAVVAAAIVL YLLRYFWRKQ IWGGAAELER QMRSRLFKHF MVMDRTFYQR HRTGDLMAHA
TNDINSIQNV AGDGILTLVD SLVTGGTTMI AMIIFTDFRL TIIALLPLPF LALGAWKLGD
KLHYSFDKSQ AAFSRLNNKT QESVSGIKVL KAFGESKQDS AAFNKMVDET IQINKKVFKW
DSMFDPLGTL IIGATYVITI IYGGLLVTNH TLSVGQLVSF IAYISNMVWP MFAIGYLFNI
LERGSASYDR VERLLYERPQ ITDENADQSL TAKDIQGDLK YDIQSFSYPD EKEIPVLQNI
DFTLKPGQTL GLVGKVGAGK TTIIELLLRE FDRYQGKITL GGHDIRNIPL KLLLNEISYV
PQNNFLFSTS IEKNIAFSDQ DAAKSKIESA AQKSDLHDDI MQMPAGYQTL VGENGVSLSG
GQKQRLSIAR ALLKESPILI LDDALSAVDA KTETAILDSL RSERKGKKTL IAAHRLTSVM
DADLILVLKN GKIVERGKHD ELLAQDGWYA EMWRKQELQA KVGEVDGQ
|
|---|
| |