Gene LGAS_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0792 
Symbol 
ID4440006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp772345 
End bp772980 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content34% 
IMG OID639672649 
ProductUracil-DNA glycosylase 
Protein accessionYP_814621 
Protein GI116629449 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000269712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.0015500000000001e-23 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATATC CAGATAAGTT ATTAGCTGAA GTCAAGGAAA GATCAAAAGG GATGAGATTA 
GAAGGAATCA ATTTTGGAGC TGGTCCAGCT CATCCTAAAT TAATGATTAT TGGTGAAGCG
CCAGGAAGAG AAGAAATAGA GTCACTGATT CCTTTTCATG GTGCTTCCGG AAAAGAATTA
ATGAAGTCGT TAGCTTCAAT TGGCTTAAAA CGAGAAGATG TCTATATTAC TAGCGCAGTA
AGAAGTCGAC CTTATAGCGT GAAGAAGGTA TTTAGTAAGA AAGAAAATAA AGAAGTCACA
AAATACCCTA ATCGAAAACC AACTAAAAAA GAAATTTTAG CGCATGCTCC TTTATTAGAT
TTCGAGTTGC GATATGCTCA ACCTAAAGTT ATTGTAACCG TGGGTACGAC TGCTTTGAGC
CGATTACTTG ACCATAAATA TGAAATTAGT AAAGTACATG GTAAAATTAT TAAAAATACC
TCGATTTTAG AATTAAACGA TAAAAAGGAT GGCTATGTTT GGTCTAAAGA AAAGTATACG
GTAGTACCGC AGTATCACCC GGCAGCAGTT TTTTATAATC GAAAACTTAC CGATATAATT
GCTCAAGATT GGTTAAATGT AAAACCTTTA ATTTAA
 
Protein sequence
MKYPDKLLAE VKERSKGMRL EGINFGAGPA HPKLMIIGEA PGREEIESLI PFHGASGKEL 
MKSLASIGLK REDVYITSAV RSRPYSVKKV FSKKENKEVT KYPNRKPTKK EILAHAPLLD
FELRYAQPKV IVTVGTTALS RLLDHKYEIS KVHGKIIKNT SILELNDKKD GYVWSKEKYT
VVPQYHPAAV FYNRKLTDII AQDWLNVKPL I