| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0787 |
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| Symbol | rimM |
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| ID | 4440036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 769327 |
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| End bp | 769848 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639672644 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_814616 |
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| Protein GI | 116629444 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1.0056e-16 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 2.29437e-28 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACTGAGT ATTTTGAAGT TGGAAAGATA TTATCTCCTC ATGGCTTAAA GGGAGAAGTT
AAGGTAAATG CGACAACTGA TTTTCCTGAG GAAAGATTAG CTAATGGGAG CAGATTATTT
ATTAAGAATA GTGATCAGTA CCAAGAATTA ATTGTAGATG GTGCGCGTCG TCATAAACAG
TTTTACTTAG TTAAATTTGA AGAAATTGAT GGTATAGATC AAGCTGAAAA AGTTTGTGGT
AAAGAATTAT ATGTAGCAGA AACAGATCAA CAAGAATTAC CCGAGGGTAG CTACTATTTC
AAAGATATTT TGAATTGCCC AGTCTATGAT GCTGAAACTG GTGAAAAGCT TGGAGTTTTA
GCAAACATTG AAACCCCTGG TGCTAACGAT ATTTGGGAGA TAAAACCAGA ACATGGCAAA
AGTTTCTGGA TTCCAAATAT TGAATCAGTC GTTAATAAGG TTGATCTAGC TAATAAGAGA
ATAGAAGTAA CTTTACTTGA GGGATTACGA GATGAAAATT AA
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| Protein sequence | MTEYFEVGKI LSPHGLKGEV KVNATTDFPE ERLANGSRLF IKNSDQYQEL IVDGARRHKQ
FYLVKFEEID GIDQAEKVCG KELYVAETDQ QELPEGSYYF KDILNCPVYD AETGEKLGVL
ANIETPGAND IWEIKPEHGK SFWIPNIESV VNKVDLANKR IEVTLLEGLR DEN
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