| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0784 |
|---|
| Symbol | |
|---|
| ID | 4440033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 767125 |
|---|
| End bp | 767466 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 639672641 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_814613 |
|---|
| Protein GI | 116629441 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2739] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.000115289 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 3.01315e-25 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAC TTGAAAAAAA TGAAAGATTA GGCGACTTAT TTGCTTACTA TGGTCCATTA
TTAACTAAGG GCCAGCAAGA TTATTTTGAG GATTATTATT ATAATGATCT ATCTTTAGGT
GAAATTGCTG ATAATCACCA TGTCTCTCGT CAAGCTGTTT ATGATAATTT AAAACGAAGC
AGTAAGGCTT TAGAAAAGTA TGAAGATAAA CTTCATATGA AACGTGATTA TACCAGAATA
GAAGAAAAAA TTACTGAAGC AGTGTATGAA CTTGAACATG GCAAAATTAA CCGAGCTCAG
ATTGAACTTT TAAAATTATT AAAACAAATG GGAGTAGAAT AG
|
|---|
| Protein sequence | MDELEKNERL GDLFAYYGPL LTKGQQDYFE DYYYNDLSLG EIADNHHVSR QAVYDNLKRS
SKALEKYEDK LHMKRDYTRI EEKITEAVYE LEHGKINRAQ IELLKLLKQM GVE
|
|---|
| |