| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0776 |
|---|
| Symbol | |
|---|
| ID | 4440025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 753960 |
|---|
| End bp | 754922 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639672633 |
|---|
| Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
|---|
| Protein accession | YP_814605 |
|---|
| Protein GI | 116629433 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000000429836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000000000000473305 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGGAAAA CGGTTTTACG TCGAATCCTG ATTATGATCC CCCAGTTACT TATCTTGAGT
TTACTAGTCT TTATTTTGGC TAAAATGATG CCTGGTGACC CATTTACTGG AATGATTAAT
CCGAATTCAG ACCCTAAGGA AATTGCAAGA TTAAGACAAG AATATGGATT AAATGATCCA
GTTTGGGTGC AATATACTCG CTGGCTAGGA AATATGTTCC ATGGTGATTT AGGGCAATCA
TACATTCAGA AGGTTCCAGT TACTTCTTTA ATTTGGGATC GTGCAGTTAA TACCTTCTGG
TTGTCTTTAA TGACTGTTGT TTTAACTTAC TTAATCGCAA TTCCATTAGG TGTTACAGCA
GGTCGTCACC AAGATGAATG GCAAGATCAC GGTGTACAAA TATTTAACTA CATTACTTAC
GCTGTGCCTC CGTTTGTTTT CTACATTTTA GGTATTTGGC TATTTGGATT TACATTAGGT
TGGTTCCCAA TTTCTGGTTC CGTTAGTGCT GATGTTAATC CAGGAACTTT GGCTTACTTC
TGGAGTAGGT TCTATCACTT GATTTTACCT TCAATTCTTT GTGCTTTGAT TTCTACTACA
GCAATCGTTC AATACTTGAG AACTGGTATT GTTGACAACA AGGTTGAAGA TTACGTAAGA
ACTGCTCGTA GTAAAGGTGT TCCAGAAAAT GTTGTCTTTA ATAAACATAT TTTAAGAAAC
TCACTTTTAC CAATCGCTGC TTTCTTTGGT AACACTATTA CTGGTTTATT GTCAGGTTCA
ATGGTTATTG AATCAGTCTT TAGTTACCCT GGTATGGGTA AGTTGTTCCT AGACTCTATT
GGACAACGTG ACTATACTAC TTTGACAGCC TTAATTTTAT TATTTGGTGT GTTAACTTTA
ATTGGTAACT TATTATCTGA TATTATCATG AGTATCATTG ACCCAAGAAT TCGGATCAAG
TAG
|
|---|
| Protein sequence | MWKTVLRRIL IMIPQLLILS LLVFILAKMM PGDPFTGMIN PNSDPKEIAR LRQEYGLNDP
VWVQYTRWLG NMFHGDLGQS YIQKVPVTSL IWDRAVNTFW LSLMTVVLTY LIAIPLGVTA
GRHQDEWQDH GVQIFNYITY AVPPFVFYIL GIWLFGFTLG WFPISGSVSA DVNPGTLAYF
WSRFYHLILP SILCALISTT AIVQYLRTGI VDNKVEDYVR TARSKGVPEN VVFNKHILRN
SLLPIAAFFG NTITGLLSGS MVIESVFSYP GMGKLFLDSI GQRDYTTLTA LILLFGVLTL
IGNLLSDIIM SIIDPRIRIK
|
|---|
| |