| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0775 |
|---|
| Symbol | |
|---|
| ID | 4440024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 752989 |
|---|
| End bp | 753957 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639672632 |
|---|
| Product | ABC-type oligopeptide transport system, ATPase component |
|---|
| Protein accession | YP_814604 |
|---|
| Protein GI | 116629432 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000138989 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00000000000731431 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATG AAATAATCGA AATAAAAAAT TTAAAAGTTC ACTATCCAAT TCGTTCTGGC
TTCTGGAATA GAGTTACTGG ATATGTCAAA GCCGTAGATG GAATTAATCT TTCTATCAAA
GAAGGAGAAA CTTATGGCTT AATTGGTGAA TCAGGTTCAG GTAAATCAAC AACTGGTAAG
GCAATTGTTG GGGTTGAAAA GGTAACCAGT GGACAAATTT TATACAAGGG CGTTGATGTA
ACTAAAGCCT CAAACCGTAA GAGACTTAAC TATAACAAAG ATGTTCAAAT GATTTTCCAG
GATTCTATGT CTAGTTTGAA CCCTAGAAAA CGTATTGAAG ATATTATTGC TGAGCCAATT
AGAAACTTCG AAAATTTAAC TACTGATGAA GAAAGAAAGA GAGTTCAGGA ACTCTTAGAT
ATCGTTGGAA TGCCTAGTGA TGCAATTTAT AAGTATCCAC ACGAATTCTC TGGTGGCCAA
CGTCAAAGAA TTGGTGTAGC ACGTGCTGTT GCTACTCATC CTAAGCTTAT TGTGGCTGAT
GAACCAACCT CAGCCTTGGA CTTATCAGTG CAAGCACAGG TTTTGAACTT TATGAAGCAT
ATTCAACAAG AATACAATAT TGCTTACCTC TTCATTTCAC ACGATTTAGG TGTTGTAAAG
CACATGTCAG AAGACATTGC GATTATGCAC CGCGGACGCT TTGTCGAAAT AGGTAAACGT
GATCAAATTT ACAAGAATCC AATGCATATT TATACTAAAC GTTTACTTTC AGCAATTCCT
GTTGTTGACG TTGAACATAG AGAACAACAC AAGGAAGAGC GTCAACGTGT AGAAAAAGAA
TTCTTGCAAG ATCAAGACAA ATGGTACGAA AAAGATGGTC GTGTCTTACC ACTTCAAAAA
GTTGGCGATC GTCATTTCGT TGCATTGCCT AAAGAAATGA TTAAGCAAGA ATTGAAGGAG
GGAGAATAG
|
|---|
| Protein sequence | MADEIIEIKN LKVHYPIRSG FWNRVTGYVK AVDGINLSIK EGETYGLIGE SGSGKSTTGK
AIVGVEKVTS GQILYKGVDV TKASNRKRLN YNKDVQMIFQ DSMSSLNPRK RIEDIIAEPI
RNFENLTTDE ERKRVQELLD IVGMPSDAIY KYPHEFSGGQ RQRIGVARAV ATHPKLIVAD
EPTSALDLSV QAQVLNFMKH IQQEYNIAYL FISHDLGVVK HMSEDIAIMH RGRFVEIGKR
DQIYKNPMHI YTKRLLSAIP VVDVEHREQH KEERQRVEKE FLQDQDKWYE KDGRVLPLQK
VGDRHFVALP KEMIKQELKE GE
|
|---|
| |