| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0762 |
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| Symbol | |
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| ID | 4440046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 739719 |
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| End bp | 741035 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639672619 |
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| Product | tRNA and rRNA cytosine-C5-methylase |
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| Protein accession | YP_814591 |
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| Protein GI | 116629419 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00000298868 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAATG CAAGAACAGT TGCTTTAGAA ACTTTGATTA AGGTTTTTAA TCAAAAGAGC
TATTCTAATA TTGCTTTAAA TAATGAACTA GTAAAACATG AATTAAAACC AGCTGATAAA
GCTTTAGCTA CAAGAATTGT TTATGGAACT ATTCAATATA AAATATTTTT AGAATATCAA
TTAAAACCAC TAATTAAAAC CAAATTGCGC GATAAGTTTT TAATGCCATT ACTTTTAATG
TCTGCATACC AATATTTTTT TCTAGAAAAA GTACCAGCAA ATGCAATTTT TGATGAAGCA
AATAAATTAG CTAAAAAATT TGCTAAGAAA AATAGTGGTA GCTATAAACT AGTTAACGGA
ATTCTACGTG CTTTAGAGCG CCAAGGAAAA GTTTTGCCAG CGCCTGATAA TTTAGTTGAT
TATTTGAGTA TCAAAGAGAG CTTTCCTAAA TGGCTGGTAG AATATTTATT AGATAACTTT
GGTGAAGATC AGACTAAAGA AATATTGGTG CGAAGTAATC AGCCAGCGGC TAACTCAATC
AGGATGGCTG TAGAGGAAGA CAAGTTTGAA GAAATCAAAG AAGCATTGAA AAAAGATGGT
TTTGATTTTA AAGAATCTTG TTTAACAGCG CATAATTTGA ACCTAAATAA GGGCGGAGTA
GCTCAAACTA ACTTGTTTAA GGATGGTAAA ATTACTATTC AAGATGCGGC TGCCTCGCTT
GCAGTAGATG CTTTTAAGTT TACTGGCGAT GAACAGGTTT TAGATGCATG TAGTGCTCCA
GGGGGAAAGA CTGTTCAAAT TGCAGAGAAA TTAACAACTG GTAACGTAAT TGCTTTAGAT
ATTCATGAAA ATAAACTAAG ACTCGTCAAA AATGCTGCTA AAAGACTTCA TGTTAGTGAT
AAAGTAAAGA CAAAGGCTCT GGATGCTAGA AAAGCTCAAG AGTATTTTAC AGCAGGGCAA
TTTGATAAAA TCTTAGTAGA TGCTCCTTGT TCTGGTCTCG GTTTAATAAG ACGTAAGCCA
GAGATTAGAT GTGAAAAGTC ATTAAATGAT ATTAAAAATT TAGCTAGAAT TCAGCTGTCC
ATTTTAGAAA ACATAAGTGG ACTTTTAACT GCAGGCGGAG AGCTGGTTTA TTCAACTTGC
ACAATTAGCC TTGAAGAAGA TGAAGGAGTA GTTAATCAAT TTTTGAAACT GCATCCTGAT
TTTGAATTAG TTCCAGTTCA AGTGGGAAAG CTTCCAAAAC AAAATATGGT AAGAATTTTT
CCTAGTGCAG ATGGCAGTGA TGGATTTTTT ATTGCAAAAT TAAAAAAACG AGGGTAA
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| Protein sequence | MSNARTVALE TLIKVFNQKS YSNIALNNEL VKHELKPADK ALATRIVYGT IQYKIFLEYQ
LKPLIKTKLR DKFLMPLLLM SAYQYFFLEK VPANAIFDEA NKLAKKFAKK NSGSYKLVNG
ILRALERQGK VLPAPDNLVD YLSIKESFPK WLVEYLLDNF GEDQTKEILV RSNQPAANSI
RMAVEEDKFE EIKEALKKDG FDFKESCLTA HNLNLNKGGV AQTNLFKDGK ITIQDAAASL
AVDAFKFTGD EQVLDACSAP GGKTVQIAEK LTTGNVIALD IHENKLRLVK NAAKRLHVSD
KVKTKALDAR KAQEYFTAGQ FDKILVDAPC SGLGLIRRKP EIRCEKSLND IKNLARIQLS
ILENISGLLT AGGELVYSTC TISLEEDEGV VNQFLKLHPD FELVPVQVGK LPKQNMVRIF
PSADGSDGFF IAKLKKRG
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