| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0758 |
|---|
| Symbol | gmk |
|---|
| ID | 4440042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 735474 |
|---|
| End bp | 736088 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639672615 |
|---|
| Product | guanylate kinase |
|---|
| Protein accession | YP_814587 |
|---|
| Protein GI | 116629415 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0194] Guanylate kinase |
|---|
| TIGRFAM ID | [TIGR03263] guanylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000000183217 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0000103593 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATC AAGGTTTATT ATTAGTTCTA TCTGGTCCTT CAGGTGTTGG TAAGGGGACC
GTTAAAAGTG CAATGGTTAA GCAAAAAGCT TTTTCATTTG AATATTCTGT TTCAATGACG
ACTCGTAAGC CTCGTCCAGG TGAAGTTGAT GGCAAGGATT ACTATTTTGT TTCGGAAGAT
CGTTTTCAAG AGGCAATTAA AGATAACGAA CTTTTGGAAT ATAATGAATA TGTAGGTAAT
CACTACGGCA CTCCTCTTGC ACCTGTTCAA AAGATGCTTA AAGAGGGCAA AGATGTTTTA
CTTGAAATTG ATGTTAATGG AGCAAAACAA GTGCGTAAGT TGATGCCAGA TGGTGTTTTT
ATCTTTTTAA CACCACCAGA TTTGCACGAA TTAAAGCATC GAATTGTTAA CCGCGGAACC
GATTCCGACA AGGTAATTGC GATGAGAATG AAGCAGGCAC GTAAAGAGAT CTTAATGATG
GAAGATTATG ATTATGCTGT AGTTAATGAT ACTGTTGCTA ATGTGGTTGA TCATATTAAA
TCTATTGTTG AAGCAGAACA CGTGCGTGTA CCGCGAGTAA TTAATGATTA TAGAAATATG
GTTAAGGAGG ATTAA
|
|---|
| Protein sequence | MAHQGLLLVL SGPSGVGKGT VKSAMVKQKA FSFEYSVSMT TRKPRPGEVD GKDYYFVSED
RFQEAIKDNE LLEYNEYVGN HYGTPLAPVQ KMLKEGKDVL LEIDVNGAKQ VRKLMPDGVF
IFLTPPDLHE LKHRIVNRGT DSDKVIAMRM KQARKEILMM EDYDYAVVND TVANVVDHIK
SIVEAEHVRV PRVINDYRNM VKED
|
|---|
| |