Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0739 |
Symbol | |
ID | 4440058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 721891 |
End bp | 722448 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672596 |
Product | hypothetical protein |
Protein accession | YP_814568 |
Protein GI | 116629396 |
COG category | [S] Function unknown |
COG ID | [COG4720] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.00147239 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGACAA AAGAAAATTC ACTGGTTTCA ATAATTATGA CTGGCTTATT TGCTGCGATA ATTTATTTAG GTGTCTGGGT CTTACGAATC CCAGTTCCAG CTTTAGTTGG TCGACCATTC ATTCATTTTG GTAATACCTT AACTGCTGTT GCAATTTTGT ATCTAGGATA TCGAAATGGA ATGTTAGCGG GAATTATTGG CTTAGGCGGT TTTGACTTAC TTAATGGTTA TGCAGCCACC TCTTGGTTAA CAATGCTTGA AGTGGTGATA GTTGCCAGTG TCTTAACGGC AGTATACAAA GGGATGCACT ATCAAGATAG TAAAAGAAAT ATTATTATTT TAGGAATTAT CGCGGGGATA ACTAAAATTT TTACAACTTA CTGTGTTTCA ATTGTAGAAG CATTGATGGT TGGAACTAGT TTAAATGTAG CTTTAGTTAG CTCTTTTGTG AGTTTACCGG CAACGGTTAT TAATTCAATT TCAACTGCAA TTTGCACGCC AATTTTGTAT TTTGCAGTGC GCGATGGTGC AAAAAGAGTT TTAAGAAAGA GTGTATAG
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Protein sequence | MRTKENSLVS IIMTGLFAAI IYLGVWVLRI PVPALVGRPF IHFGNTLTAV AILYLGYRNG MLAGIIGLGG FDLLNGYAAT SWLTMLEVVI VASVLTAVYK GMHYQDSKRN IIILGIIAGI TKIFTTYCVS IVEALMVGTS LNVALVSSFV SLPATVINSI STAICTPILY FAVRDGAKRV LRKSV
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