| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0703 |
|---|
| Symbol | |
|---|
| ID | 4440090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 686373 |
|---|
| End bp | 687206 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639672560 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_814533 |
|---|
| Protein GI | 116629361 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.149694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 110 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAA ATGAAAACGA GTTAGTAGCT AAAATCATTG ATGATCCTGT ATTCAGCTGG
GTGATGGAAC AAGATGATAA TTGTTGCAAA TTATTGCAAG CAATTTTACC AGAGCTGAAT
ATTACTCGAG TCGAATTTGA AACGCAAAAG AGATTAAAGT TTCATCCAGA AAAACGGGGA
ACGATTCTAG ATATTTTAGC TTATGATCAA AAAGGACGAG TCTATGATAT TGAACTACAG
GTATTACAGA ATAAGTTTCT TGCTCAACGA ATTCGATATT ATTTTTCAAT GATTGATCAG
AATTTGTTGA TGAGTGGTGG TAAGTATCGA GATTTACCAG AGACTTATGT GATTTTTATT
TTGCCAAATG ATCCATATGA TCAAGATGAA AAATACTATG AATTTGCTTT TCAGCAGTTG
AAACGAAAAA ATCCATTGGT GCTTGATACT AAGCAACACG CAATTATCTT AAATGCGAGT
GGGAGTATCG GTGAGGTTAC ACCGCGTCTA CAAGGCTTTT TTGACTTGAT TCATGATAAA
ATAAGTACAA AAGATGAGTT TATTGAAAAA TTGAATCGAG AAGTTAAAAA GTTCGGTACT
GATCCGGGAA GGAGAAAAGA ACTTATGGAT TATCAGATGA GATTAGATGA TGAAAGAGAA
TTTGGTAAGG AACTAGGTCG AGAACAAGAA GAGATTAATG CAATTCAGAA GTTAATAAAA
ATTACCCGAC AATTAAAAGC AAGCGATGAC TTTATCTTGA AGCAATTAAT TGCTAATTAT
GGCGATGATT TTTCGAAAGA AGAGTTGCAA GAATTTATTA AAAAGAATAA ATAA
|
|---|
| Protein sequence | MRKNENELVA KIIDDPVFSW VMEQDDNCCK LLQAILPELN ITRVEFETQK RLKFHPEKRG
TILDILAYDQ KGRVYDIELQ VLQNKFLAQR IRYYFSMIDQ NLLMSGGKYR DLPETYVIFI
LPNDPYDQDE KYYEFAFQQL KRKNPLVLDT KQHAIILNAS GSIGEVTPRL QGFFDLIHDK
ISTKDEFIEK LNREVKKFGT DPGRRKELMD YQMRLDDERE FGKELGREQE EINAIQKLIK
ITRQLKASDD FILKQLIANY GDDFSKEELQ EFIKKNK
|
|---|
| |