| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0687 |
|---|
| Symbol | |
|---|
| ID | 4440109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 673583 |
|---|
| End bp | 674734 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639672544 |
|---|
| Product | Phage Mu gp47 related protein |
|---|
| Protein accession | YP_814517 |
|---|
| Protein GI | 116629345 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3299] Uncharacterized homolog of phage Mu protein gp47 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 126 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCCAA ATGAACTAAT TACTGAATTT CAGAATAAAG ATTATGACTA CTTTTTAAGA
AAAATGCTTG ATGCTGTGCC TGATAATATT GACAAGCGTG AGGGTTCAAT AATCTATGAC
GCTTTAGCTC CTGCTGCGTT AGTTATGGGG CAGCAATCCT TAGATATGGC TAATGTAATC
AAAGAAACTT ATATCAAAAC AGCCTCTGGA GAGTTCCTAG ACTATCGAGC AATTGAACAT
GGGACAAGTC GATATCCTGC TACTCAAACA GAAGCTAAGG CTAAAGTTTT AAATGACAAG
AAAGAACCGT TAGATAATGT TCAAATAGGC GATAAGTTTG CCAGCATTGG CGACTCACCC
ATTTTTTATG CTGTGACAAA AGTCAATGAT GACTTGACTG TTGAATTAAC AGCAGAAGTT
AAAGGTTCAA GCGCTAATAG TTATATCGGG CAGATTTTAC CTGTTACTCC CAACGACTTG
CTTTCATGGG CTGAAATTAC AGAAATTACA GCTCCTGCAA GGGATGTAGA AAGTGACGAC
CACTTAAGAG CAAGATTGCT GAGTTCTCAA AGTTGGATTG CTTACGGTGG TAATGTGGCT
GATTACTTAG ATATGACTAG CAAGATTGAT GAAGTTGGAG CTGCGCAGAT TTATCCAACA
TGGAACGGCG GGGGAACTGT CAAGGTAGTT ATCTTGAATA ACGACCTAAT GCCTGCTAGT
GCTAGTTTAG TACAGAAAGT TAAAAATATA CTTGACCCAG AAGATAAACA AGCAGAGGGT
TATGGATTAG CTCCAATTGA CCATGCTGTA ACTGTGACTG CTCCTGAAGA ATTAATTGTA
AATGTTGATA TTTCAGTAAA ACTTGATGAT ACAAAAGTAA CACGGTATGT GAAAGACAGC
ATTACTAAAG CAGTTGAGGG CTACTTCCAA TCATTGAGAA AGGACTGGGC AGATATCAAT
CAAAAACTTG GTAGGGGTTA TGAAGAAACC ATATATCGTT CTAAGATCCT GTCTCAAGTT
ATGCTGACGG AAGGTGTGGT CAATGCTAAA CTTCCATCTT TGAACGGGCG GGACGCAGAC
ATTGACTTAG TTTTTAATAA TTCCAAGTCG CAATTGCCAG TAGTCGGGAC GGTGACAATT
AATGAGCAAT AA
|
|---|
| Protein sequence | MSPNELITEF QNKDYDYFLR KMLDAVPDNI DKREGSIIYD ALAPAALVMG QQSLDMANVI
KETYIKTASG EFLDYRAIEH GTSRYPATQT EAKAKVLNDK KEPLDNVQIG DKFASIGDSP
IFYAVTKVND DLTVELTAEV KGSSANSYIG QILPVTPNDL LSWAEITEIT APARDVESDD
HLRARLLSSQ SWIAYGGNVA DYLDMTSKID EVGAAQIYPT WNGGGTVKVV ILNNDLMPAS
ASLVQKVKNI LDPEDKQAEG YGLAPIDHAV TVTAPEELIV NVDISVKLDD TKVTRYVKDS
ITKAVEGYFQ SLRKDWADIN QKLGRGYEET IYRSKILSQV MLTEGVVNAK LPSLNGRDAD
IDLVFNNSKS QLPVVGTVTI NEQ
|
|---|
| |