Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0683 |
Symbol | |
ID | 4440140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 671140 |
End bp | 671829 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672540 |
Product | Phage related protein |
Protein accession | YP_814513 |
Protein GI | 116629341 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 87 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 143 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTTAATA TGCCGGTCAA CGGCTTTGGT GTTTATATCA CTGATTATTC AACTAATAGA ACGGTTGAAT TGCCTGTGAA CCCGTCAGAA TTAACTTTGA AATATGAAAC TGATGATAAA TCAGAAACTA TTGTGAACTT GGGAGAGATT AATCGAGTAG GTAACATGAA ATTGGTATCT CTTACGATTG ATAGTGTCTT TCCAAAGAAA CATAGTTCTT GGATTAGTTC AGATAAGCTG TTAAAACCTG ATGAATACAT TAATTGGCTT AAAAACATTC AAGCTAATAA ACATCATGTT CAATTAGTTG TCAGCTCTAC TCAAATTAGT GTAACTATGA CGATTTCTAG TTTTGAATAT GGCTTTAAGA GCGGCTTTGC AGATGAATAT GCTTATACTT TGGGCTTAAA GCAGTATAGA GAAGTTAAGT ACCATAAAGT TAACGTCCCA GCCCCTCCAA AACCTAAACC AAGACCAGCT CCTCCTAAGA AGTTAGGCAT TGGTTCAATT GTAATTGTAA ATGGCCGGCT GCGCTTAGAC AGTTATGGAA GTGCGCCGGG TGTATATGAA AATAATGTAA GAAGACGAAT TACTTATTTA GCGCCTGGGC ATCCTTTTCC AATTCATGTT GCTTTAGTGA ATGGAGGACC TAGAGGTTGG GTTAGACAGA GTGAAGTGAG ATTAGCATGA
|
Protein sequence | MVNMPVNGFG VYITDYSTNR TVELPVNPSE LTLKYETDDK SETIVNLGEI NRVGNMKLVS LTIDSVFPKK HSSWISSDKL LKPDEYINWL KNIQANKHHV QLVVSSTQIS VTMTISSFEY GFKSGFADEY AYTLGLKQYR EVKYHKVNVP APPKPKPRPA PPKKLGIGSI VIVNGRLRLD SYGSAPGVYE NNVRRRITYL APGHPFPIHV ALVNGGPRGW VRQSEVRLA
|
| |