Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0644 |
Symbol | |
ID | 4440167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 646207 |
End bp | 647019 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672501 |
Product | hypothetical protein |
Protein accession | YP_814476 |
Protein GI | 116629304 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000408961 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 187 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGTTTG TCGGAGAAGT AAAAGATCGT GCAAGTTGGG CATTACACTT CGCACAAGTT AAAGCTAATA TCAAACAACC ACAAAGAAGT CATAAGGTTC AAGTATCAGG AAAAACTAAA ACTGGTAAGC CTTATACGTA TGAATACAAG TATGCAGACT TAGCAGACGT TGATAAATCA GTTATGGAAG CCACTAAAAA AGTTGTTGAT GATAAAGGCA ATGTACAGTT TACTTACTTT TTTGATGTTA ACAACACGGA TCAAGGTGTA GATGTACAAA CCATTCTAGT AGATGTATCT GGCTTTTATG CTGTCACAAA TAAAGTTTGG TTTAAAAACT TTAATGTGGG AGACGCACAG AAAACAGCTA GCTTAATCAG TTATGCTAAG CGTTATTCCT TAAGTGCAGC TTTTGGAATT GCTAGTGAAG ATGACGATGA TGCGCAGGAC GTAAAAAATA TTGAAGAGCC TAAAGTCTTA TCTAAACAAG AGTTAGATAA TTACACGGTT TACTATAACG GAATTAAAGC TAATCTAGCT GAATTATATC AAGAAGCTGT AGATGGAATT GCTGATGCTC AAGATTGGAT TAGAGGATCA CATACTCCGC AGGACGCCCA AGCCATTTAT CAGTTAAATC AAAGTTACAA ACGGCGTGAA AAAGATAAGC AAGAGGCTTT AAAGAAAGCC GAAGAGGAAG CTAAAAAAGA AGAAAAATTA AGAGAAGCAC AGCGAAGTGA AGAGAAGCCA AAACAAGAAG ATGTATCCAA TTTATTCGGA ACATTACCTG CTGACGGGGA ATACATCAAA TAG
|
Protein sequence | MEFVGEVKDR ASWALHFAQV KANIKQPQRS HKVQVSGKTK TGKPYTYEYK YADLADVDKS VMEATKKVVD DKGNVQFTYF FDVNNTDQGV DVQTILVDVS GFYAVTNKVW FKNFNVGDAQ KTASLISYAK RYSLSAAFGI ASEDDDDAQD VKNIEEPKVL SKQELDNYTV YYNGIKANLA ELYQEAVDGI ADAQDWIRGS HTPQDAQAIY QLNQSYKRRE KDKQEALKKA EEEAKKEEKL REAQRSEEKP KQEDVSNLFG TLPADGEYIK
|
| |