| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0570 |
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| Symbol | |
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| ID | 4440211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 599231 |
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| End bp | 600562 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672427 |
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| Product | cellobiose-specific PTS system IIC component |
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| Protein accession | YP_814405 |
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| Protein GI | 116629233 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.976789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.163994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTT TAGTTAAATG GCTTGAAACT TACGTTTTAC CGCCTGCATC TCGTTTAGCT
CAAGTTCGGT GGCTAGTTGC AATGCGGGAT ACTTTCATTT CTTTATTACC GATTACAATG
GCTGGTTCAA TTGCGATGCT ATTTAATAGC ATCATTAGAG CCGCTAAAGT ACAGATGCAT
TGGGATACTT TTTATTCTTT GATGCAGCCA GTTGTCGCAA TTGATAATAT TATTTGGGAA
GGTACATTCG CACTTTTTGC AGTTTATTTT GCGATTTCTT GGGGCTATCA CTTAGCTAAG
ACCTATGAAG TAAATCGTTT TGCTGGCTCA GTTGCTTCCT TAGTTGCCTT TGCAATGAGT
ATTAGTGATT CAGTAAAATT ACATATTGAT GGAGACGTAG TTGATATTAA AAATGCTTTT
GATATCAAGC AATTTTCAAC AATGGGCTTG TTTACGGCTA TTATTTTTGG TTGCATTGGG
ACTGCCTTGT TTATTGTATT TTATAAGGCA AGAATTCGAC TCAAAGTTGA TACCAGTATG
CCTCATGCTG AATGGGTGGC ATTTAGTACC TTAATTCCAA TTTTACTTTC AGTGTTTATT
GTTGGCTTTG TTAATTATGC ATTTCAACGG CTTACTGGAA CTTATTTTGG CAATTGGCTT
CTTGCGACTA TTCAGCGTCC CTTGGTTAAT TTGGGACAGG GATTTGGAGT CGTCTTATTG
GTTACCTTTC TGGTGCAAAT TTTTTGGTTC TTTGGAATTA ACGGCATCAG TGTTTTAACT
CCAGTAATGG ACTCTTTGTG GTTAACCCCA GAAAATATTA ACGTTACAGC TGTTCGAAAC
AGTGAGCGTG TTCCATATAT TTGGGTTCGC GATTCATTTA ATGTATTTGC CTGGTTTGGT
GGAGCAGGAG GTACCCTAGT ATTAATTATT GCGATCTTAA TGTTTTCTAA ACGTAAAGAT
TATCGAACAA TAGCTAAGAT GGCTGTAGCA CCTGGTATAT TCAATATTAA TGAACCTATT
ATTTTTGGCT TGCCTGTAGT TTTTAATCCA GTTTATTTAA TTCCATTTGT TGTTGCTCCG
CTTGTAAATG TGTCACTAGC ATATTGGGCA ACAACGGCAG GTCTAGTTAA TCCGGTTCAA
ATTTTTGTTC CAACAGTAAT GCCGCCACTT ATTGGGCCGT TTCTAGCATG TAATTATGAT
TGGCGAGCTA TTGTTTTAGC ACTTATTAAT ATGGTAATCG CACTTCTTAT TTGGATGCCG
TTTGTTTTTG CGGCTGACCA GATCACTAAG CAAGATAATA ATCAACGTAA TTTCTATTTA
CCACAGTATT AA
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| Protein sequence | MSSLVKWLET YVLPPASRLA QVRWLVAMRD TFISLLPITM AGSIAMLFNS IIRAAKVQMH
WDTFYSLMQP VVAIDNIIWE GTFALFAVYF AISWGYHLAK TYEVNRFAGS VASLVAFAMS
ISDSVKLHID GDVVDIKNAF DIKQFSTMGL FTAIIFGCIG TALFIVFYKA RIRLKVDTSM
PHAEWVAFST LIPILLSVFI VGFVNYAFQR LTGTYFGNWL LATIQRPLVN LGQGFGVVLL
VTFLVQIFWF FGINGISVLT PVMDSLWLTP ENINVTAVRN SERVPYIWVR DSFNVFAWFG
GAGGTLVLII AILMFSKRKD YRTIAKMAVA PGIFNINEPI IFGLPVVFNP VYLIPFVVAP
LVNVSLAYWA TTAGLVNPVQ IFVPTVMPPL IGPFLACNYD WRAIVLALIN MVIALLIWMP
FVFAADQITK QDNNQRNFYL PQY
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