Gene LGAS_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0566 
Symbol 
ID4440241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp595192 
End bp595761 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content34% 
IMG OID639672423 
Producthypoxanthine-guanine phosphoribosyltransferase 
Protein accessionYP_814401 
Protein GI116629229 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0161542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00589759 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAATA GTGATAATAT TGACAACATT ATTGATCGTG TTTTATTCAG CCAAGATGAT 
ATTGAAGAAA TTTGTCAAAG ACTTGGCAAA CAATTGACTG AAGATTACGC TGGAAAGTTT
CCATTAGTCA TTGGCGTATT AAAGGGTGCA GTTTATTTCA TGACGGATTT AACTCGGCAC
ATGAATGTAA AGATGCAAAA TGATTTCATG GATGTTTCAA GCTATGGTGA CGGTTTTGAG
TCAAGTGGTA AAGTCAGATT AGATATTGAT GTTCAAGCTG ATGTCAAAGA TAGAGACGTT
TTACTAGTTG AAGATATTGT TGATACTGGT CATACTTTGA AGTTCATGAA GGATCTATTA
AACAAGCGTG GTGCCAAAAG TGTAAAATGC TGTGCTTTAC TTAATAAGAC TGAACGTCGT
GAAGATAATG TAGTTGTAGA TTACTATGGA TCAAAAGTGG AAAATGCGTT TGTTGTTGGT
TATGGTTTAG ACTACTTAAA TGCATATCGT AATTTACCTT ATGTCGGCGT TTTAAAGCCA
GAAGTTATTC AGGCAAACTT AAATCGTTAA
 
Protein sequence
MQNSDNIDNI IDRVLFSQDD IEEICQRLGK QLTEDYAGKF PLVIGVLKGA VYFMTDLTRH 
MNVKMQNDFM DVSSYGDGFE SSGKVRLDID VQADVKDRDV LLVEDIVDTG HTLKFMKDLL
NKRGAKSVKC CALLNKTERR EDNVVVDYYG SKVENAFVVG YGLDYLNAYR NLPYVGVLKP
EVIQANLNR