| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0562 |
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| Symbol | |
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| ID | 4440237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 589566 |
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| End bp | 592022 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672419 |
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| Product | putative phosphoketolase |
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| Protein accession | YP_814397 |
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| Protein GI | 116629225 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0000340609 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAATA CTGTAATAAG CAATGAAAAC TATTTCAAGG AGATACTTGC TATGGTAATA
AATTATGATT CTGAAGAATA CTTAAAGAGC GTCGACGCAT ATTGGCGTGC TGCCAACTAC
TTATCAGTTG GTCAGCTATT TTTAATGAAT AATCCACTAT TAAAAGGCGA ATTAAAGGCT
AAAGATGTAA AACCTAAGCC AATTGGACAC TGGGGCACAA TTGTTCCACA AAACTTTATT
TATGCTCATT TAAATCGAGC AATTAAAAAG TATGATTTAA ACATGTTCTA TATTGAAGGT
TCTGGTCATG GTGGCCAAGT AATGGTATCT AACTCATACT TAGATGGCTC ATATACTGAG
CGCTATCCAG AAATTACTCA AGATGAAAAG GGAATGGCTA AGTTGTTTAA GCAATTTAGT
TTTCCAGGTG GAGTTGCTTC TCATGCTGCA CCAGAAACAC CGGGATCAAT CCATGAAGGT
GGAGAGTTAG GTTACTCACT TTCTCATGGT GTTGGTGCAA TTTTAGATAA TCCTGATGTA
ATTGCAGCTG TTGAAATTGG TGATGGGGAA TCCGAAACTG GCCCACTTGC TACTTCTTGG
TTCTCAAGCA AGTTTATTAA TCCAATTAAA GATGGTGCTG TAATTCCTAT CTTACAAATT
AATGGTTTTA AGATTTCTAA CCCAACTATC GTTTCAAGAA TGAGCGATGA AGATTTAACT
AAATATTTTG AAGGAATGGG CTGGAAGCCA TACTTTGTTT CTGCATATAA AGATGGCGAA
TTCAATGGTT ACAAGGATCA CATGGAAGTT CACCACGAGA TGGCTAAGAC AATGGATGAA
GTTGTTGAAG AAATTAAGGC TATTCAAAAG CATGCTCGTG AAAATAATGA TGATTCATTA
GTGAAATGGC CAATGATTGT CTTTAGAGTA CCTAAGGGCT GGACTGGACC TAAATTTGAC
TTAGATGGTA ATCCAATTGA AAATAGTTTC CGTGCTCACC AAATTCCAAT TCCAGTTTCT
CAAGGGGATA TGAGTCATAA GGAAATGCTT ACTGACTGGA TGGAAAGCTA CAAGCCAGAA
GAATTATTCA ATGAGGATGG ATCACCTAAG GAGATCGTTA AAGAAAATAC CTTGTCAGGC
GACCAAAGAA TGGCGATGAA TCCAGTAACT AACGGTGGAA TTAATCCTAA AGTTTTAAAT
ATGCCTGATT ACCGTGATTT TGCAGTGAAA TTTGATAAAC CTGGTTCTGT TGAGAAGCAA
GATATGGCTG AATGGGCAAA ATACTTAGAT AAGATGGCTG CCTTAAATCC AACTAATTTC
CGCGGTTTTG GTCCAGATGA AACTAAATCT AATCGTTTAT TCCAACTTTT AGATAATCAA
AAACGTCAAT GGATGGAAAA TATTCATACT CCAAATGATG AAAACTTGGC TCGCGAAGGT
CGCGTGATTG ATTCGCAATT ATCTGAACAC CAAGATGAAG GATGGCTTGA AGGTTACGTT
TTGACAGGCA GACATGGCTT TTTTGCAACT TATGAAGCAT TTGGCCGCGT AGTTGATTCA
ATGCTTACCC AACACATGAA GTGGTTAAGA AAAGCAAAAG AACAAACTTG GCGTCATGAT
TATCCAGCTT TGAACTTAGT TGATACTTCA ACTGTTTTCC AACAAGATCA TAACGGTTAT
ACTCACCAAG ATCCTGGTAT GTTAACCCAC CTTTATGAAA AGAACCGTCC AGATTTAATT
CATGAATACT TACCAGCAGA TACTAACTCA CTTCTTGCTG TATCTGATAA GGCATTTAGA
GATCGTGAAT GCATTAACGT TTTAGTAACT TCTAAGCAAC CTCGTCCGCA ATGGTTCTCG
ATTGAAGAAG CTAAAAAGTT AGTTGATAAA GGTCTTGGCT ACATTGATTG GGCATCAACT
GATAAGGGTG CTAAGCCAGA TGTTGTCTTT GCTTCCACTG GTACTGAACC AACGATTGAG
TCATTAGCTG CAATTGACTT ATTGCACAAA AAGTTTCCAG ACTTAAAGAT TCGCTACATT
AATGTTATTG ATGTCATGAA ATTAATGTCT CCAGAAAAGA ATCCAAATGC AATCAGCAAT
GAAGAATTCG ATCGTCTTTT CCCTAAAGGT ACACCAGTCA TCTTTGCTTG GCATGGTTTC
AAACCAATGA TGGAGTCAAT TTGGTTTGAC CGTGGACGCG GAAAAAATGA CGTTCATATT
CATGGCTATG AAGAAAATGG TGATATTACT ACGCCATTTG ACATGCGAGT ATTGAACCAT
ATGGATCGTT ATGATTTAGC AAAAGATGTT GTCGAAAGTG TTTCCGACCT AAGTGAAAAG
AATGCTGACT TTATTGATGA AATGGATAGC TTGCTTGCTA AACACCATCA ATATATTCGC
GATAATGGTA AAGATATGCC TGAAGTTACA GAATGGCAAT GGAATGGTTT AAAATAA
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| Protein sequence | MINTVISNEN YFKEILAMVI NYDSEEYLKS VDAYWRAANY LSVGQLFLMN NPLLKGELKA
KDVKPKPIGH WGTIVPQNFI YAHLNRAIKK YDLNMFYIEG SGHGGQVMVS NSYLDGSYTE
RYPEITQDEK GMAKLFKQFS FPGGVASHAA PETPGSIHEG GELGYSLSHG VGAILDNPDV
IAAVEIGDGE SETGPLATSW FSSKFINPIK DGAVIPILQI NGFKISNPTI VSRMSDEDLT
KYFEGMGWKP YFVSAYKDGE FNGYKDHMEV HHEMAKTMDE VVEEIKAIQK HARENNDDSL
VKWPMIVFRV PKGWTGPKFD LDGNPIENSF RAHQIPIPVS QGDMSHKEML TDWMESYKPE
ELFNEDGSPK EIVKENTLSG DQRMAMNPVT NGGINPKVLN MPDYRDFAVK FDKPGSVEKQ
DMAEWAKYLD KMAALNPTNF RGFGPDETKS NRLFQLLDNQ KRQWMENIHT PNDENLAREG
RVIDSQLSEH QDEGWLEGYV LTGRHGFFAT YEAFGRVVDS MLTQHMKWLR KAKEQTWRHD
YPALNLVDTS TVFQQDHNGY THQDPGMLTH LYEKNRPDLI HEYLPADTNS LLAVSDKAFR
DRECINVLVT SKQPRPQWFS IEEAKKLVDK GLGYIDWAST DKGAKPDVVF ASTGTEPTIE
SLAAIDLLHK KFPDLKIRYI NVIDVMKLMS PEKNPNAISN EEFDRLFPKG TPVIFAWHGF
KPMMESIWFD RGRGKNDVHI HGYEENGDIT TPFDMRVLNH MDRYDLAKDV VESVSDLSEK
NADFIDEMDS LLAKHHQYIR DNGKDMPEVT EWQWNGLK
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