Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0558 |
Symbol | |
ID | 4440233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 586390 |
End bp | 587343 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672415 |
Product | inosine-uridine nucleoside N-ribohydrolase |
Protein accession | YP_814393 |
Protein GI | 116629221 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000277639 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.000000766068 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATACGTA AAATAGAAAG AAGGACCTTT ATGTCAAAAA AGCCCTTAAT TATTAGTACA GATCCAGGAA TCGATGATGT TGCTGCAATA ACGATTAGTC TTTTTGCAGC TGATCTTGAT GTTAAAATGA TCGTACCAAC TTGGGGCAAT GTTTCCTTAG AGCATACCCT ACAAAATACT CTTGATTTAG AAAAATTTTT ACATACTGAA GTGCCTGTAG TGAAAGGTGC TAATCAACCA TTGGTACGTC CAGCTATTAG CGCTGCTTCA GTTCACGGTA AGACAGGAAT CGCTGGTTTT GAATTTGAAA AAGCAAATAG TGATTTACTT GAAGAAGGAC TTGCTGCTAC TAAGATGTAT GAAGAAATTA AAAGCAGTCC TGAAAAAGTA ACTCTTTTAG GAATCGGGCC GTTAACTGAC TTTGCGCTTT TATTTAAACA ATATCCTGAT GTAGTAGACA ATATTGCTGA AGTTTACATT ATGGGTGGAA ATATTGGCCA CGGAAATCAT AGTCCATTTG CAGAATATAA TATTGCTGGA GATCCAGAAG CTGCTCAAAT TGTCTTTCAT TCTGGGTTGC CAGTCTATGT TGCTCCACTC GAGGTTGGTG ATAAAGCACA TCTAACCAAA GATCAAATGG ATAAGATTAA GGAATGTGGC GAAGTTGGAA ATATGCTATA TTCAATGTTC TCAAATATTC ATGAACCTGA TGGAGATACT AGAATTAAGA TTTATGATCC AACTGCCGTA GGAATTATGC TTCATCCTGA ATTTTTCACC TTAAAACCTG CGAATGTTGA AATTGAATTA GCTGGACGTT ATACTTATGG CGCTAGCGTG ATGGACTTTT TAAGTGAAGA ACATAATGCG CAAATCGCAA CCGACGTCGA TACAAAGAGC TTTGCAACTT GGTTTGTTCA AAGTATCCAA GCTGCCAATA ACGGGAGAAA ATAA
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Protein sequence | MIRKIERRTF MSKKPLIIST DPGIDDVAAI TISLFAADLD VKMIVPTWGN VSLEHTLQNT LDLEKFLHTE VPVVKGANQP LVRPAISAAS VHGKTGIAGF EFEKANSDLL EEGLAATKMY EEIKSSPEKV TLLGIGPLTD FALLFKQYPD VVDNIAEVYI MGGNIGHGNH SPFAEYNIAG DPEAAQIVFH SGLPVYVAPL EVGDKAHLTK DQMDKIKECG EVGNMLYSMF SNIHEPDGDT RIKIYDPTAV GIMLHPEFFT LKPANVEIEL AGRYTYGASV MDFLSEEHNA QIATDVDTKS FATWFVQSIQ AANNGRK
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