Gene LGAS_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0558 
Symbol 
ID4440233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp586390 
End bp587343 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content37% 
IMG OID639672415 
Productinosine-uridine nucleoside N-ribohydrolase 
Protein accessionYP_814393 
Protein GI116629221 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000277639 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000000766068 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATACGTA AAATAGAAAG AAGGACCTTT ATGTCAAAAA AGCCCTTAAT TATTAGTACA 
GATCCAGGAA TCGATGATGT TGCTGCAATA ACGATTAGTC TTTTTGCAGC TGATCTTGAT
GTTAAAATGA TCGTACCAAC TTGGGGCAAT GTTTCCTTAG AGCATACCCT ACAAAATACT
CTTGATTTAG AAAAATTTTT ACATACTGAA GTGCCTGTAG TGAAAGGTGC TAATCAACCA
TTGGTACGTC CAGCTATTAG CGCTGCTTCA GTTCACGGTA AGACAGGAAT CGCTGGTTTT
GAATTTGAAA AAGCAAATAG TGATTTACTT GAAGAAGGAC TTGCTGCTAC TAAGATGTAT
GAAGAAATTA AAAGCAGTCC TGAAAAAGTA ACTCTTTTAG GAATCGGGCC GTTAACTGAC
TTTGCGCTTT TATTTAAACA ATATCCTGAT GTAGTAGACA ATATTGCTGA AGTTTACATT
ATGGGTGGAA ATATTGGCCA CGGAAATCAT AGTCCATTTG CAGAATATAA TATTGCTGGA
GATCCAGAAG CTGCTCAAAT TGTCTTTCAT TCTGGGTTGC CAGTCTATGT TGCTCCACTC
GAGGTTGGTG ATAAAGCACA TCTAACCAAA GATCAAATGG ATAAGATTAA GGAATGTGGC
GAAGTTGGAA ATATGCTATA TTCAATGTTC TCAAATATTC ATGAACCTGA TGGAGATACT
AGAATTAAGA TTTATGATCC AACTGCCGTA GGAATTATGC TTCATCCTGA ATTTTTCACC
TTAAAACCTG CGAATGTTGA AATTGAATTA GCTGGACGTT ATACTTATGG CGCTAGCGTG
ATGGACTTTT TAAGTGAAGA ACATAATGCG CAAATCGCAA CCGACGTCGA TACAAAGAGC
TTTGCAACTT GGTTTGTTCA AAGTATCCAA GCTGCCAATA ACGGGAGAAA ATAA
 
Protein sequence
MIRKIERRTF MSKKPLIIST DPGIDDVAAI TISLFAADLD VKMIVPTWGN VSLEHTLQNT 
LDLEKFLHTE VPVVKGANQP LVRPAISAAS VHGKTGIAGF EFEKANSDLL EEGLAATKMY
EEIKSSPEKV TLLGIGPLTD FALLFKQYPD VVDNIAEVYI MGGNIGHGNH SPFAEYNIAG
DPEAAQIVFH SGLPVYVAPL EVGDKAHLTK DQMDKIKECG EVGNMLYSMF SNIHEPDGDT
RIKIYDPTAV GIMLHPEFFT LKPANVEIEL AGRYTYGASV MDFLSEEHNA QIATDVDTKS
FATWFVQSIQ AANNGRK