| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0553 |
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| Symbol | |
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| ID | 4440228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 582071 |
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| End bp | 583609 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672410 |
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| Product | C4-dicarboxylate anaerobic carrier dcuC |
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| Protein accession | YP_814388 |
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| Protein GI | 116629216 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1288] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 7.693670000000001e-19 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAATA CAGTTCAAAA AAAGAAAAAG CATCAATTTC CAACAGCGTA TACGGTTATT
ATTATCGTTC TGTTATTGGT GCAGATTTTA ACATTTTTTA TCCCATCAGG TAATTATGCA
ACGCTTGAGT ATGATCAACC TAATAAGGAA TTTGTGATTA CTAAGCCAAA TGGTAGTAAG
CATAAAGAGG CAGCAACTCA AAAAACTTTA GATAAGTATA AAGTTAAGAT TGATGTGAAG
AAGTTTACTA ATGGTACTAT TTATAAGCCA GTGGCAATTC CTGATTCTTA TGAAAAGATT
GATCAGAAAA AGCCAGGATT AGGTGGAGCA ATTTATCAAT TTTTATCTTC ACAAGTAAAC
GGAATTGCGC AAAGTATTGA TATTATTGCC TTTGTTTTAA TTCTGGGTGG ATGTATTGGC
GTTGTGCACG CAAATGGTGC TATTGATGCC GGTATGCAGG CACTTTCTAA AAAGATCAAG
GGTAAGCAAG TATTACTAAT CGTTTTGGTA ATGGGCTTGA TTGCCATTGG TGGTACAACC
TTTGGTTTAG CTGAAGAGAC CATGGCTTTT TATCCAATTT TGATTCCCGT ATTCTTACTG
GCTGGCTTTG ATCGTATGAC GGTTGTCGCG ACGATCTTCT TAGGAACCAG TATTGGTACG
ATGGCGTCGA CGATTAACCC ATTTTCAACT GTAATTGCTT CTAACACTGC TGGTGTTAAC
TTCACAGAGG CATTGCCGTT AAGAATTTGT ATGTGGGCAA CTTGCGTTAT TGTGGGGATG
ATTTATGTTA TCGCTTATGC CAAAAAGGTA CAAAAGAACC CCAAGGCCTC ATATGTTTAT
AATGACTTCG TTAAAGAAGA TCAAGAATAT CTGAATCAAG ACCAAACAAC GCAAGAACAA
GAATTTACTT GGCGTCAAAA ATTAACATTG CTTGTTTTCG CAATTGCATT TATCGTAATG
ATTTGGGGTG TTCAGCAAAA GGGCTGGTAC TTTACTGAAA TTGCGGTTGT CTTCTTGGCA
ACTGGATATA TTTTTGCCTT TATTTCAGGC TTGAGCGAGC ACAAGTTTGT TGAAAGCTTT
GTAAATGGCG CAGGCGACTT ATTAGGTGTG GCTTTAACAA TTGGATTAGC GCGTGCCGTT
TCAATTGTAA TGGAAGAAAG TCATACTAGC GATACCATCA TGAACTTCTT TAGCCAACAA
GTCTCTGGTA TGCCACCACT AGTGTTCATT TGGTTTATGT TCTTGGTCTA CATTGTTTTA
GGCTTCTTTA TTCAATCATC TTCTGGTTTA GCCGTTCTCT CAATGCCAAT TATGGCGCCA
TTAGCCAACG TAGTTGGTAT TGACCGAGCA AGCATTATTG ATGCTTATAA CTGGGGACAG
GGCTTTATCA GTTTGGTAGC TCCAACTGGT TTGATTTTAA TGAGCTTAAT GATGGTGAAT
ATCGGCTTTA ACAAATGGTT TAAGTTTTGC TGGAAATTAT TAGTAATTGA GTTTGGTATT
TGTTTAGCAT TTTTAGCAAT TGGTCTGGTT GTTTACTGA
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| Protein sequence | MSNTVQKKKK HQFPTAYTVI IIVLLLVQIL TFFIPSGNYA TLEYDQPNKE FVITKPNGSK
HKEAATQKTL DKYKVKIDVK KFTNGTIYKP VAIPDSYEKI DQKKPGLGGA IYQFLSSQVN
GIAQSIDIIA FVLILGGCIG VVHANGAIDA GMQALSKKIK GKQVLLIVLV MGLIAIGGTT
FGLAEETMAF YPILIPVFLL AGFDRMTVVA TIFLGTSIGT MASTINPFST VIASNTAGVN
FTEALPLRIC MWATCVIVGM IYVIAYAKKV QKNPKASYVY NDFVKEDQEY LNQDQTTQEQ
EFTWRQKLTL LVFAIAFIVM IWGVQQKGWY FTEIAVVFLA TGYIFAFISG LSEHKFVESF
VNGAGDLLGV ALTIGLARAV SIVMEESHTS DTIMNFFSQQ VSGMPPLVFI WFMFLVYIVL
GFFIQSSSGL AVLSMPIMAP LANVVGIDRA SIIDAYNWGQ GFISLVAPTG LILMSLMMVN
IGFNKWFKFC WKLLVIEFGI CLAFLAIGLV VY
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