Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0549 |
Symbol | |
ID | 4440224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 578769 |
End bp | 579659 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672406 |
Product | ABC-type phosphate transport system, permease component |
Protein accession | YP_814384 |
Protein GI | 116629212 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0581] ABC-type phosphate transport system, permease component |
TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00903188 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 2.03288e-22 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATGCAA AAACGCGTAA TAAAATTGCT ACTGCTGGTA TTTATACCTT GGTGAGTATT GTCGTAATTA TTCTTTTTGG AATTTTGGGC GATATTTTAG TTTCTGGTGT ACCGCATCTT TCATGGCATT TTTTATCTTC TGAAGCCTCT TCTTATCAAG CTGGTGGCGG AGTACGAGAT CAGCTGTTTA ACTCTTTGTA TTTGCTAGTC TTGACACTGA TTATTTCTTT GCCAATTGCA TTAGGCGCTG GGATTTATTT AGCAGAATAT GCTAAGGATA ATTGGTTTAC AAACTTAATT AGGACAACCA TTGAGATTTT AAGTTCTTTA CCATCCATTG TTGTAGGTTT ATTTGGTTAC TTATTATTTG TAGTGCAATT TGGTTTTGGC TTTTCCATTA TTTCTGGTGC ATTGGCACTA ACATTTTTTA ATCTACCAAC TTTGACTAGT AATATTGAAC AAGCTATTGA AGGTGTTCCA CAAGCTCAAA GAGATGCTGG ACTTGCTTTA GGCTTATCTA ATTGGAAGAC GATTCGGGGA ATTGTTTTAC CAGCAGCTTT GCCAGGAATT TTGACAGGTA TTATTTTAAG TGCTGGTAGA ATTTTTGGTG AAGCAGCAGC CTTAATTTAT ACTGCAGGTC AAAGTGGATC AACGATTGAT TATAGTAATT GGAATCCGCT TAGCCCAACT AGTTTCTTAA ATGTTATGCG CCCAGCAGAA ACTTTAGCTG TTCATATTTG GAAAGTTAAT ACAGAAGGAA TCATTCCGGA TGCAACTATT GTTTCAGCTG CAACTTCTGC TTTATTAATT ATTGTGGTAA TTTTGTTTAA CCTAGGTGCA CGTGCTTTAG GTAACCATTT ATACCGTAAG TTGACAGCTG CTAAGTCATA A
|
Protein sequence | MNAKTRNKIA TAGIYTLVSI VVIILFGILG DILVSGVPHL SWHFLSSEAS SYQAGGGVRD QLFNSLYLLV LTLIISLPIA LGAGIYLAEY AKDNWFTNLI RTTIEILSSL PSIVVGLFGY LLFVVQFGFG FSIISGALAL TFFNLPTLTS NIEQAIEGVP QAQRDAGLAL GLSNWKTIRG IVLPAALPGI LTGIILSAGR IFGEAAALIY TAGQSGSTID YSNWNPLSPT SFLNVMRPAE TLAVHIWKVN TEGIIPDATI VSAATSALLI IVVILFNLGA RALGNHLYRK LTAAKS
|
| |