| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0542 |
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| Symbol | |
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| ID | 4440252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 570113 |
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| End bp | 572914 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639672399 |
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| Product | cation transport ATPase |
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| Protein accession | YP_814377 |
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| Protein GI | 116629205 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01106] sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 1.404e-23 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATAACTT TGACTAAAAA TGATGAAAAC GATGAGATAA TTAAGGTTGC TCAATTATCT
GTTGAAGATG CACTGAAGGA ATTAAATACT AGTCAAAGTG GCTTAACAAT TGATGAAGTT
CATACACTAC AGCAAAAATA TGGAAAGAAT ATTTTTGCCA AAGCAAACCA GGAGCCACTT
TGGAAGAAAT TTTTAGCTAA TTTTACTAAT TTAATGGCGA TTCTGCTTTG GGTAGCAGGT
ATTATTGCTT TTTGTGCTGA TTTAGTGCAA TTAGGAATTG CTATTTGGGC CGTAAATATC
ATTAATGGTA TTTTTAGTTT TTGGCAAGAA TTTCAAGCTG ATAAGGCAAC TGAAGCGCTA
GCGAATATGC TTCCTTCTTA TACAAGAGTT GTAAGAAACG GAAAAGAAGA AAAGATTTTA
GCTAATGATT TAGTACCCGG CGATATCGTT AAGCTTGAAG AAGGAGACGA TATCCCAGCT
GACATTCGTG TAATTGCTGC AACAACGGCT CAAGCTGATC AATCTTCGTT GACTGGCGAA
GTGAACCCAG TTCATAAGGG TGCTCATGCT GTTGAAGACG CGAAGAAGAA AAATCACGCT
GATCTTAATA ACATGATTTT CTCTGGTACC AATATGATGA AGGGTAATGT TACTGGAGTT
GTTGTTAAGA CGGGGATGAA TACTGATTTT GGTAAGATTG CTGAATTAAC ACAAAATGTT
GCTCAGCAAA AGAGTCCGCT TGAAAAAGAA CTGGATACTT TAACTAAGCA GATTTCAATT
TTAGCCATTT CAATTGGGAT TATTTTCTTC TTAATTGCTA CTTTCTTTGT TCACTATCCT
TTAGTAAAAG GCTTTGTCTT TGCTCTAGGA ATGATTGTAG CTTTTATACC AGAAGGATTA
GAACCAACAG TTACTTTATC TTTAGCTGGG GCGGTTCAAC GAATGGCAAA AAAGCACGCT
CTAATTAAGC GTTTATCTAG CGTAGAAACG TTAGGTTCGA CATCAGTGAT TTGTTCTGAT
AAAACAGGAA CTTTAACTAA GAATGAAATG ACAGTTAAAG AACTTTGGAC CCTAGAAAAA
AGCTACCATG TTTCTGGCGA AGGCTATGCA GTTCGAGGCC ATATTAAAGA AGGACCAACG
CATGTTTTCG CTAAAGATAA TGACACTTTA AAAGAAGTAT TACTTGGTGG AGTTTTTGCA
GACAATGCAA AAATTCAAGC ACCAGATAAG AAGCATCTAC GCTATCAAAT CTTGGGAGAT
CCAACTGAAG CATGCCTTGA AGTGGTTGCT CGAAAAGGTA AAGTTGATGT TGAAGCTGAA
TTAAAAAATA CGCCGCGAGT TAAAGAACTA CCATTTGATT CAAGCAGAAA AATGATGACG
GTAATTCAAA GCTCTGATGG CACACACCGT TTTAATACCT ATACTAAGGG TGCTCCGAAC
TGTGTAGTTG ATAAGTGTAC TTCTTATTTA GAACACGGTG AGATAAAGCC TATTACCCAG
GAAATAAAAG ATAAGATTAT GCGAGCTAAT GATGGCTATG CGAAGGATGG CCTGCGTGTT
TTAGCAGTTG CAGGACGTAA TCTTGATCAA AAGATGATGG ATAATTTAGA TTCAGCAACA
ATTGAAACTG TTGAAAAGGA TCTTACTTTC TTAGGCTTGA CAGTCATGAT GGATCCACCA
AGAGCAGAAG TGTATAAAGC CGCTCGTGAA TGTCGCAAAG CTGGAATTAA GGTAACGATG
GTTACCGGTG ATTATGGCTT AACTGCTAAA AGTATTGCAC GCCAAATTGG TTTGAACGAT
CCAGATAAGC CTTTAACTGT AATTACAGGG GATGCCTTAA AGACAATGCC AGATGATGAA
TTAAGACATT ATCTTGAAGG TGAGGTTGTC TTTGCTCGAA TGGCACCTGA GCAAAAATAC
CGTGTCGTTT CTATGTATGA AAAAATGGGC AAGATTGTTG CTGCTACCGG TGACGGTGTT
AATGATGCTC CAGCCTTAAA GAAAGCCAAT ATTGGAATTG CCATGGGCGG TACTGGTACT
GATGTTGCAA AAGAAGCAGC CGATATGATT TTGACTGATG ATAATTTTGC ATCTATTGTC
GGAGCAATTA AAGAAGGACG CGGAGTCTAC AGCAATATTC GTAAGTTTTT AATTTACATC
TTAAACTCAA ATATGCCAGA AGCAGTTCCT TCAGTTTTGT TCTTGCTTTC AGGTGGTGCA
ATTCCGCTTG CTTTAACTGT AATGGAAATT CTATTTATTG ACTTAGGAAC AGATATGATT
CCAGCTCTTG GATTAGGACG TGAAGATCCT GAAAAAGGCA TCATGGATCG ACCTCCACGG
TCGCCTAAGG ATCACTTAAT TAATAAGCAT GTTTTAGCTA AAGCATTTTT ATGGTATGGC
TTAATTGCTT CAATTATTGC GACAGCAGCA TTCTTTGGTG CTAACTTCTA TCGTGGTCAT
ATTTTTCCAA ATTTACCAGA GGTAGGTTGG GATTATCGTC AAGCAACGAC AGTAACGTTG
GCTGCAATTA TCTTTTGTCA GATTGCGGCA GTATTAAATA TTCGTTATTC AAGACAATCA
ATGTTTAATA AGCATTTCTT CAAGAATTCC ATGATCTTTA TCGGAATTAT TATGGAGATA
GTTTTGTTGC TATGCATTTC TTACGTGCCA GTTTTCCAGT CATTCTTTGG TACGGAGCCA
CTTAATTCAC ATGATTGGAT TATGCTAGTA TGTATTCCAA TTCCGCTAAT TTTAATTGAT
GAGTTAAGAA AGTGGATTTT AAGGAAAAAT TATAAAAAGT AA
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| Protein sequence | MITLTKNDEN DEIIKVAQLS VEDALKELNT SQSGLTIDEV HTLQQKYGKN IFAKANQEPL
WKKFLANFTN LMAILLWVAG IIAFCADLVQ LGIAIWAVNI INGIFSFWQE FQADKATEAL
ANMLPSYTRV VRNGKEEKIL ANDLVPGDIV KLEEGDDIPA DIRVIAATTA QADQSSLTGE
VNPVHKGAHA VEDAKKKNHA DLNNMIFSGT NMMKGNVTGV VVKTGMNTDF GKIAELTQNV
AQQKSPLEKE LDTLTKQISI LAISIGIIFF LIATFFVHYP LVKGFVFALG MIVAFIPEGL
EPTVTLSLAG AVQRMAKKHA LIKRLSSVET LGSTSVICSD KTGTLTKNEM TVKELWTLEK
SYHVSGEGYA VRGHIKEGPT HVFAKDNDTL KEVLLGGVFA DNAKIQAPDK KHLRYQILGD
PTEACLEVVA RKGKVDVEAE LKNTPRVKEL PFDSSRKMMT VIQSSDGTHR FNTYTKGAPN
CVVDKCTSYL EHGEIKPITQ EIKDKIMRAN DGYAKDGLRV LAVAGRNLDQ KMMDNLDSAT
IETVEKDLTF LGLTVMMDPP RAEVYKAARE CRKAGIKVTM VTGDYGLTAK SIARQIGLND
PDKPLTVITG DALKTMPDDE LRHYLEGEVV FARMAPEQKY RVVSMYEKMG KIVAATGDGV
NDAPALKKAN IGIAMGGTGT DVAKEAADMI LTDDNFASIV GAIKEGRGVY SNIRKFLIYI
LNSNMPEAVP SVLFLLSGGA IPLALTVMEI LFIDLGTDMI PALGLGREDP EKGIMDRPPR
SPKDHLINKH VLAKAFLWYG LIASIIATAA FFGANFYRGH IFPNLPEVGW DYRQATTVTL
AAIIFCQIAA VLNIRYSRQS MFNKHFFKNS MIFIGIIMEI VLLLCISYVP VFQSFFGTEP
LNSHDWIMLV CIPIPLILID ELRKWILRKN YKK
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