Gene LGAS_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0539 
Symbol 
ID4440249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp568837 
End bp569304 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content36% 
IMG OID639672396 
Producthypothetical protein 
Protein accessionYP_814374 
Protein GI116629202 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value2.06239e-16 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTATTG GATATTTCTT TGCTCCATTC TTAGCAAAGA AGTTAGGTGC CATTGTTTCT 
ATTGCTGCTG GGACCTTAAC TTGTGCACCA TTAATGTTCT TAATGGCTAA TGGTCGGCAT
TTTGGTACTG GAATTACTCT TTTTGTAGTT GTAGGAGTTT TGCTATTTTT ACGTAGTGGT
TTAGCAAATG CAACAATGCC GATTCAGCAA GAAGTACAGA TGATTATTGT AGATAAGGAT
ATGCGTCCAG CATTTACTGC TGTGGTTCAG ATTGCATATG CGGTAATTGG AATAATTGAT
GGATTATTTA CAGCCTTTTA TTTACTTAAG ACGCCAGCTG GGTATGCGAA TGCATACTAC
ATTGCGACTG CTCTATATGT AGTAGTAAGT ATCTTATTAA TTGTAATGTT TGCTAAGCAG
TATAACTGGA TCTTAGATGA GAAAAAGAGC AAATCTAATG AAAAATAG
 
Protein sequence
MFIGYFFAPF LAKKLGAIVS IAAGTLTCAP LMFLMANGRH FGTGITLFVV VGVLLFLRSG 
LANATMPIQQ EVQMIIVDKD MRPAFTAVVQ IAYAVIGIID GLFTAFYLLK TPAGYANAYY
IATALYVVVS ILLIVMFAKQ YNWILDEKKS KSNEK