Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0539 |
Symbol | |
ID | 4440249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 568837 |
End bp | 569304 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639672396 |
Product | hypothetical protein |
Protein accession | YP_814374 |
Protein GI | 116629202 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 2.06239e-16 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTTATTG GATATTTCTT TGCTCCATTC TTAGCAAAGA AGTTAGGTGC CATTGTTTCT ATTGCTGCTG GGACCTTAAC TTGTGCACCA TTAATGTTCT TAATGGCTAA TGGTCGGCAT TTTGGTACTG GAATTACTCT TTTTGTAGTT GTAGGAGTTT TGCTATTTTT ACGTAGTGGT TTAGCAAATG CAACAATGCC GATTCAGCAA GAAGTACAGA TGATTATTGT AGATAAGGAT ATGCGTCCAG CATTTACTGC TGTGGTTCAG ATTGCATATG CGGTAATTGG AATAATTGAT GGATTATTTA CAGCCTTTTA TTTACTTAAG ACGCCAGCTG GGTATGCGAA TGCATACTAC ATTGCGACTG CTCTATATGT AGTAGTAAGT ATCTTATTAA TTGTAATGTT TGCTAAGCAG TATAACTGGA TCTTAGATGA GAAAAAGAGC AAATCTAATG AAAAATAG
|
Protein sequence | MFIGYFFAPF LAKKLGAIVS IAAGTLTCAP LMFLMANGRH FGTGITLFVV VGVLLFLRSG LANATMPIQQ EVQMIIVDKD MRPAFTAVVQ IAYAVIGIID GLFTAFYLLK TPAGYANAYY IATALYVVVS ILLIVMFAKQ YNWILDEKKS KSNEK
|
| |