Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0529 |
Symbol | |
ID | 4440274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 558524 |
End bp | 559357 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672386 |
Product | amino acid ABC transporter periplasmic protein |
Protein accession | YP_814364 |
Protein GI | 116629192 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.488243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.00197621 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTAAAA TGAAAAAATC AATTAAGATT TTTATTTTAC CTTTGGTATT AGTTTTACTG ATTACTTTAA CCGGATGTGC CAAAAAGCAA AAATCAAGTA ATATTTATGA ACAGGTTAAA GAAAGTAAAA CCATTACTTG GGGCGTTAAG GCTGATACGC GATTATTTGG TTTAATGAGT ATTAAAACTG GAAAAATCGA AGGCTTTGAA GTGGATTTAG CAAAAGCCTT AACTAAACAA ATGTTAGGTA AAAATGCAAA AACTGAATTT GTGCAAACTA CGCCTAAGAC GAGAATTCCG CTACTTAAGA ATGGTAACAT TGATGCAATT TTAGCAACAA TGACGATTAC ACCTGATCGT AAAAAACAAG TAACTTTTAG TGAACCATAC TTTACTGCAG GTCAATCTTT ACTAGTTAAA GATAATTCAA CTATTAAGAA TGTTAAGGAT CTTAATGGTA AAACTGCTTT AGCGGTAAAG GGAACAACAG CAGTTGATAA TGTTAAAAAA TTTGCACCTA AAGCAAAAGT TTTAGAGTAT GACGATTATG GTCAAGCTTT TACTGCCTTA AAAGCGGGAC AAGGTCAAGC AATGACTACT GATAACGGTT TACTTGCCGG AATTGCGAGT GAAAATAAAG GCTATAAATT AGTTGGTGGT ACCTACACCA GTGAGCCTTA CGGGATTGCT GTAGAAAAAG GACAAACCGA TTTTGCTGAC CGTATTAATA AGGCACTAAA TGAATTAAAG AAAAACGGAA CATATCATCG TTTGTTAGTT AAATGGTTCA ATGGTATTCC AGGATTTAAC ATTAAGGAGG TTGAAAATTC GTGA
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Protein sequence | MAKMKKSIKI FILPLVLVLL ITLTGCAKKQ KSSNIYEQVK ESKTITWGVK ADTRLFGLMS IKTGKIEGFE VDLAKALTKQ MLGKNAKTEF VQTTPKTRIP LLKNGNIDAI LATMTITPDR KKQVTFSEPY FTAGQSLLVK DNSTIKNVKD LNGKTALAVK GTTAVDNVKK FAPKAKVLEY DDYGQAFTAL KAGQGQAMTT DNGLLAGIAS ENKGYKLVGG TYTSEPYGIA VEKGQTDFAD RINKALNELK KNGTYHRLLV KWFNGIPGFN IKEVENS
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